A8FIU2 (A8FIU2_BACP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate dehydrogenase PIRNR PIRNR000185

Gene names

Name:	gdhA EMBL ABV64159.1
Ordered Locus Names:	BPUM_3511

Organism

Bacillus pumilus (strain SAFR-032) [Complete proteome] [HAMAP]

Taxonomic identifier

315750 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	456 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the Glu/Leu/Phe/Val dehydrogenases family. RuleBase RU004417 PIRNR PIRNR000185

Ontologies

Keywords
Molecular function	Oxidoreductase PIRNR PIRNR000185 EMBL ABV64159.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	136	1	By similarity PIRSR PIRSR000185-1

Sequences

	Sequence		Length	Mass (Da)
	A8FIU2 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: 9B33E5896F6E8428	FASTA	456	49,737
	10 20 30 40 50 60 MLTLDRAAQT AQSYIDRVLE EVEKRNPGEE EFQQAVREIL ESLVPVFAKH PEYEKQGILE 70 80 90 100 110 120 RLIEPERLVV FRVPWIDDEG KVQVNRGFRV QFNSAIGPYK GGIRFHPSVN ASIIKFLGFE 130 140 150 160 170 180 QIFKNALTGM PIGGGKGGSD FDPKGKSDGE IMRFVQSFMS ELSRYIGPDQ DVPAGDIGVG 190 200 210 220 230 240 AREIGYMFGQ YKKMRGAYEA GVLTGKSPGF GGSLARKEAT GYGLVYFMEE MLKANGLQFE 250 260 270 280 290 300 GRSVVVSGSG NVSIYAMEKV IELGGKVVAC SDSSGAIYDP QGISLETVKR LKEVSNQRIG 310 320 330 340 350 360 AYIDIHPHAE LIEDCEQIWS VPCDIALPCA TQNEISEMQA QQLVENGVIA VGEGANMPST 370 380 390 400 410 420 LKAVKVFEQN DILFAPAKAA NAGGVGVSAL EMAQNSARMS WTFEEVDDQL KQMMQTIYRQ 430 440 450 CTETADEYGH SGNLIVGANI AGFRKVADAM IAQGVI

References

[1]

"Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032." Gioia J., Yerrapragada S., Qin X., Jiang H., Igboeli O.C., Muzny D., Dugan-Rocha S., Ding Y., Hawes A., Liu W., Perez L., Kovar C., Dinh H., Lee S., Nazareth L., Blyth P., Holder M., Buhay C. , Tirumalai M.R., Liu Y., Dasgupta I., Bokhetache L., Fujita M., Karouia F., Eswara Moorthy P., Siefert J., Uzman A., Buzumbo P., Verma A., Zwiya H., McWilliams B.D., Olowu A., Clinkenbeard K.D., Newcombe D., Golebiewski L., Petrosino J.F., Nicholson W.L., Fox G.E., Venkateswaran K., Highlander S.K., Weinstock G.M. PLoS ONE 2:E928-E928(2007) [PubMed: 17895969] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000813 Genomic DNA. Translation: ABV64159.1.
RefSeq	YP_001488719.1. NC_009848.1.
3D structure databases
ProteinModelPortal	A8FIU2.
SMR	A8FIU2. Positions 2-455.
ModBase	Search...
Protein-protein interaction databases
STRING	A8FIU2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBACT00000065562; EBBACP00000063895; EBBACG00000065553.
GeneID	5622805.
GenomeReviews	Gene locus BPUM_3511 in contig CP000813_GR.
KEGG	bpu:BPUM_3511.
PATRIC	18970990. VBIBacPum16546_3564.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0334.
GeneTree	EBGT00050000001222.
HOGENOM	HBG590661.
OMA	KGLTYGG.
ProtClustDB	PRK09414.
Family and domain databases
InterPro	IPR006095. Glu/Leu/Phe/Val_DH. IPR006096. Glu/Leu/Phe/Val_DH_C. IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom. IPR014362. Glu_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00262.
Pfam	PF00208. ELFV_dehydrog. 1 hit. PF02812. ELFV_dehydrog_N. 1 hit. [Graphical view]
PIRSF	PIRSF000185. Glu_DH. 1 hit.
PRINTS	PR00082. GLFDHDRGNASE.
SMART	SM00839. ELFV_dehydrog. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8FIU2_BACP2

Accession

Primary (citable) accession number: A8FIU2

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	January 25, 2012
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)