A8FG03 (A8FG03_BACP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-N-arabinofuranosidase EMBL ABV63170.1
EC=3.2.1.55 EMBL ABV63170.1

Gene names

Name:	abfA EMBL ABV63170.1
Ordered Locus Names:	BPUM_2508

Organism

Bacillus pumilus (strain SAFR-032) [Complete proteome] [HAMAP]

Taxonomic identifier

315750 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	492 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABV63170.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-N-arabinofuranosidase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8FG03 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: FF82692174F66AA0	FASTA	492	56,152
	10 20 30 40 50 60 MKGTVKVNDV IGRISKHIYG HFQEHLGRGI YDGIWVGKDS EIDHIEGIRT DVLKALQALH 70 80 90 100 110 120 IPVLRWPGGC FADEYHWANG VGDLSERKPM VNTHWGGTVE SNEFGTHEFM KLCELLECEP 130 140 150 160 170 180 YICGNVGSGT VQELADWVEY ITFPKGTPMS DWRIQNGKHE PWDLTYVGVG NESWGCGGNM 190 200 210 220 230 240 TPEYYADLYK RYQTYVREFV GQSIYKIACG ANSNDVNWTK VLMERAAPWM DGLSLHYYTV 250 260 270 280 290 300 PGTWEKKGSA TEFDEDEWFI TLKKAYEMER LVLDHGEIMD RYDPDKRIGM IIDEWGTWYD 310 320 330 340 350 360 PEPGTNPGFL YQQNTLRDAL VCALHFHIFH RHCQRIHMAN IAQTVNVLQA MVLTEDEKML 370 380 390 400 410 420 LTPTYHVFHM FQVHQVEEAL EVDFVSTPYE RSGEKIPQVS VSASRSSDKM HISFCHLNPH 430 440 450 460 470 480 EQNEVSLAIE GLDAQTKVTG RVLTADRMNA HNTFDDPHAV QPVEFQQFAV KSGELTIDLP 490 PMSVVMITID LA

References

[1]

"Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032." Gioia J., Yerrapragada S., Qin X., Jiang H., Igboeli O.C., Muzny D., Dugan-Rocha S., Ding Y., Hawes A., Liu W., Perez L., Kovar C., Dinh H., Lee S., Nazareth L., Blyth P., Holder M., Buhay C. , Tirumalai M.R., Liu Y., Dasgupta I., Bokhetache L., Fujita M., Karouia F., Eswara Moorthy P., Siefert J., Uzman A., Buzumbo P., Verma A., Zwiya H., McWilliams B.D., Olowu A., Clinkenbeard K.D., Newcombe D., Golebiewski L., Petrosino J.F., Nicholson W.L., Fox G.E., Venkateswaran K., Highlander S.K., Weinstock G.M. PLoS ONE 2:E928-E928(2007) [PubMed: 17895969] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000813 Genomic DNA. Translation: ABV63170.1.
RefSeq	YP_001487730.1. NC_009848.1.
3D structure databases
ProteinModelPortal	A8FG03.
ModBase	Search...
Protein-protein interaction databases
STRING	A8FG03.
Protein family/group databases
CAZy	GH51. Glycoside Hydrolase Family 51.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBACT00000065474; EBBACP00000063807; EBBACG00000065465.
GeneID	5621778.
GenomeReviews	Gene locus BPUM_2508 in contig CP000813_GR.
KEGG	bpu:BPUM_2508.
PATRIC	18968942. VBIBacPum16546_2565.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3534.
GeneTree	EBGT00050000002580.
HOGENOM	HBG654651.
OMA	IPVLRWP.
Family and domain databases
InterPro	IPR010720. Alpha-L-AF_C. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01209.
Pfam	PF06964. Alpha-L-AF_C. 1 hit. [Graphical view]
SMART	SM00813. Alpha-L-AF_C. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8FG03_BACP2

Accession

Primary (citable) accession number: A8FG03

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)