A8FFK9 (A8FFK9_BACP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cystathionine beta-lyase EMBL ABV63026.1
EC=4.4.1.8 EMBL ABV63026.1

Gene names

Name:	yrhB EMBL ABV63026.1
Ordered Locus Names:	BPUM_2360

Organism

Bacillus pumilus (strain SAFR-032) [Complete proteome] [HAMAP]

Taxonomic identifier

315750 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	382 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU004507
Sequence similarities	Belongs to the trans-sulfuration enzymes family. RuleBase RU004079

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU004507
Molecular function	Lyase EMBL ABV63026.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cystathionine beta-lyase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8FFK9 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: D8C51480551303DF	FASTA	382	41,558
	10 20 30 40 50 60 MKRKTMMIHS GTTGDEKTGA VSVPIYQVST YKQPKAGEHT GYEYSRTANP TRTALETAIR 70 80 90 100 110 120 DLEGGANGYA FGSGMAAITA VMMLFNSGDH IVLTDDVYGG TYRVITKVLN RIDIQATFVD 130 140 150 160 170 180 TSDPEAVKKA ILPETKAVYI ESPTNPLLKM TDLKAVGQLT KEANILMIVD NTFFTPYFQR 190 200 210 220 230 240 PIEYGADIVL HSATKYLGGH SDVVGGLVVT ATEELGEELH FVQNSTGGIL GPQDSWLLMR 250 260 270 280 290 300 GIKTLGLRME AHQQNAQKIA EFLEQHPAVT RVYYPGLDAH PGHELAKTQA SGYGGMISFD 310 320 330 340 350 360 IGKEEHVDVF LSQLKLFTIA ESLGAVESLI SVPARMTHAS IPKDRREELG ITDGLIRISV 370 380 GIEDVDDLLN DMKQGLNALV NG

References

[1]

"Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032." Gioia J., Yerrapragada S., Qin X., Jiang H., Igboeli O.C., Muzny D., Dugan-Rocha S., Ding Y., Hawes A., Liu W., Perez L., Kovar C., Dinh H., Lee S., Nazareth L., Blyth P., Holder M., Buhay C. , Tirumalai M.R., Liu Y., Dasgupta I., Bokhetache L., Fujita M., Karouia F., Eswara Moorthy P., Siefert J., Uzman A., Buzumbo P., Verma A., Zwiya H., McWilliams B.D., Olowu A., Clinkenbeard K.D., Newcombe D., Golebiewski L., Petrosino J.F., Nicholson W.L., Fox G.E., Venkateswaran K., Highlander S.K., Weinstock G.M. PLoS ONE 2:E928-E928(2007) [PubMed: 17895969] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000813 Genomic DNA. Translation: ABV63026.1.
RefSeq	YP_001487586.1. NC_009848.1.
3D structure databases
ProteinModelPortal	A8FFK9.
ModBase	Search...
Protein-protein interaction databases
STRING	A8FFK9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBACT00000065930; EBBACP00000064263; EBBACG00000065921.
GeneID	5621629.
GenomeReviews	Gene locus BPUM_2360 in contig CP000813_GR.
KEGG	bpu:BPUM_2360.
PATRIC	18968636. VBIBacPum16546_2413.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0626.
GeneTree	EBGT00070000031827.
HOGENOM	HBG754729.
OMA	NQYEYSR.
ProtClustDB	PRK07671.
Family and domain databases
InterPro	IPR000277. Cys/Met-Metab_PyrdxlP-dep_enz. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K01760.
PANTHER	PTHR11808. Cys_Met_Meta_PP. 1 hit.
Pfam	PF01053. Cys_Met_Meta_PP. 1 hit. [Graphical view]
PIRSF	PIRSF001434. CGS. 1 hit.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00868. CYS_MET_METAB_PP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8FFK9_BACP2

Accession

Primary (citable) accession number: A8FFK9

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)