A8FEM4 (A8FEM4_BACP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribosomal protein S1 EMBL ABV62691.1

Gene names

Name:	rpsA EMBL ABV62691.1
Ordered Locus Names:	BPUM_2021

Organism

Bacillus pumilus (strain SAFR-032) [Complete proteome] [HAMAP] EMBL ABV62691.1

Taxonomic identifier

315750 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus pumilus

Protein attributes

Sequence length	383 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein EMBL ABV62691.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8FEM4 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: 7C814A0618BBFE93	FASTA	383	42,704
	10 20 30 40 50 60 MTEEMNQIDV QVPEVGDVVK GIVSKVEDKH VNVDIVNVKQ PGIIPISELS SLHVEKASDV 70 80 90 100 110 120 VKDGDELELK VTKVEDDALI LSKRAVDADR AWEDLERKFE TKEVFEAEVK DVVKGGLVVD 130 140 150 160 170 180 IGVRGFIPAS LVEAHYVEDF SDYKGKTLSL VVVELDREKN RVILSHRAVV EQEQLDKKQD 190 200 210 220 230 240 FLQKLEVGSV IDGKVQRLTD FGAFVDIGGI DGLVHISQLS HAHVEKPSDV VEEGQEVQVK 250 260 270 280 290 300 VLAVDRDNER ISLSIKETLP GPWSQIGEKV KQGDVLEGTV QRLVSFGAFV EILPGVEGLV 310 320 330 340 350 360 HISQISHKHI GTPHEVLEEG QTVKVKVLDV NEDEERISLS IRDLEENPEK QIEENYRQYQ 370 380 AKEENTSGFQ LGDLIGDKLN KLK

References

[1]

"Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032." Gioia J., Yerrapragada S., Qin X., Jiang H., Igboeli O.C., Muzny D., Dugan-Rocha S., Ding Y., Hawes A., Liu W., Perez L., Kovar C., Dinh H., Lee S., Nazareth L., Blyth P., Holder M., Buhay C. , Tirumalai M.R., Liu Y., Dasgupta I., Bokhetache L., Fujita M., Karouia F., Eswara Moorthy P., Siefert J., Uzman A., Buzumbo P., Verma A., Zwiya H., McWilliams B.D., Olowu A., Clinkenbeard K.D., Newcombe D., Golebiewski L., Petrosino J.F., Nicholson W.L., Fox G.E., Venkateswaran K., Highlander S.K., Weinstock G.M. PLoS ONE 2:E928-E928(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SAFR-032.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000813 Genomic DNA. Translation: ABV62691.1.
RefSeq	YP_001487251.1. NC_009848.1.
3D structure databases
ProteinModelPortal	A8FEM4.
ModBase	Search...
Protein-protein interaction databases
STRING	315750.BPUM_2021.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABV62691; ABV62691; BPUM_2021.
GeneID	5621290.
KEGG	bpu:BPUM_2021.
PATRIC	18967942. VBIBacPum16546_2067.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0539.
HOGENOM	HOG000044053.
KO	K02945.
OMA	WQQFART.
ProtClustDB	PRK06676.
Enzyme and pathway databases
BioCyc	BPUM315750:GH6N-2110-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 4 hits.
InterPro	IPR012340. NA-bd_OB-fold. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR000110. Ribosomal_S1. IPR022967. RNA-binding_domain_S1. [Graphical view]
Pfam	PF00575. S1. 4 hits. [Graphical view]
PIRSF	PIRSF002111. RpsA. 1 hit.
PRINTS	PR00681. RIBOSOMALS1.
SMART	SM00316. S1. 4 hits. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 4 hits.
PROSITE	PS50126. S1. 4 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8FEM4_BACP2

Accession

Primary (citable) accession number: A8FEM4

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)