A8FE35 (A8FE35_BACP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Xylan 1,4-beta-xylosidase EMBL ABV62502.1
EC=3.2.1.37 EMBL ABV62502.1

Gene names

Name:	xynB EMBL ABV62502.1
Ordered Locus Names:	BPUM_1831

Organism

Bacillus pumilus (strain SAFR-032) [Complete proteome] [HAMAP]

Taxonomic identifier

315750 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	534 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABV62502.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	xylan 1,4-beta-xylosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8FE35 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: D8BE1DFDE8140AC3	FASTA	534	61,304
	10 20 30 40 50 60 MKITNPVLRG FNPDPSICRV GEDYYMAVST FEWFPGVQIY HSKDLVHWRL AARPLQKTSQ 70 80 90 100 110 120 LDMKGNPDSG GVWAPCLSYA DGHFWLIYSD IKVVDGPFKD GHNYLVTANE VDGDWSEPVK 130 140 150 160 170 180 LNSSGFDPSL FHDQSGKKYV LNMLWDHREK HHSFAGIALQ EYSVTEKKLI GERKVIFKGT 190 200 210 220 230 240 PIKLTEAPHL YHIGDYYYLL TAEGGTRYEH AATIARSPQI EGPYEVHPDN PILSAFHTPE 250 260 270 280 290 300 HPLQKCGHAS IVQTHTNEWY LAHLTGRPIQ SSKESIFQQR GWCPLGRETA IQKLEWKDGW 310 320 330 340 350 360 PYVVGGKEGA LEVEAPAINE KVFAPTYHTV DEFKESTLNR HFQTLRIPFT EQIGSLTEKP 370 380 390 400 410 420 QHLRLYGQES LTSKFTQAFV ARRWQSFYFE AETAVSFFPE NFQQAAGLVN YYNTENWTAL 430 440 450 460 470 480 QVTYDEEFGR ILELSACQNL SFSQPLTQKI VIPEEVTYVY LKVIVQKETY TYSYSFDQKD 490 500 510 520 530 WKDIDVIFES SHLSDDFIRG GGFFTGAFVG MQCQDTSGER LPADFNYFRY EETE

References

[1]

"Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032." Gioia J., Yerrapragada S., Qin X., Jiang H., Igboeli O.C., Muzny D., Dugan-Rocha S., Ding Y., Hawes A., Liu W., Perez L., Kovar C., Dinh H., Lee S., Nazareth L., Blyth P., Holder M., Buhay C. , Tirumalai M.R., Liu Y., Dasgupta I., Bokhetache L., Fujita M., Karouia F., Eswara Moorthy P., Siefert J., Uzman A., Buzumbo P., Verma A., Zwiya H., McWilliams B.D., Olowu A., Clinkenbeard K.D., Newcombe D., Golebiewski L., Petrosino J.F., Nicholson W.L., Fox G.E., Venkateswaran K., Highlander S.K., Weinstock G.M. PLoS ONE 2:E928-E928(2007) [PubMed: 17895969] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000813 Genomic DNA. Translation: ABV62502.1.
RefSeq	YP_001487062.1. NC_009848.1.
3D structure databases
ProteinModelPortal	A8FE35.
SMR	A8FE35. Positions 2-532.
ModBase	Search...
Protein-protein interaction databases
STRING	A8FE35.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBACT00000063145; EBBACP00000061478; EBBACG00000063136.
GeneID	5621098.
GenomeReviews	Gene locus BPUM_1831 in contig CP000813_GR.
KEGG	bpu:BPUM_1831.
PATRIC	18967546. VBIBacPum16546_1869.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3507.
GeneTree	EBGT00050000001041.
HOGENOM	HBG347235.
OMA	IGSWFEQ.
ProtClustDB	CLSK883496.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KO	K01198.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8FE35_BACP2

Accession

Primary (citable) accession number: A8FE35

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)