A8FAE1 (A8FAE1_BACP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Spore germination protein EMBL ABV61208.1

Gene names

Name:	yaaH EMBL ABV61208.1
Ordered Locus Names:	BPUM_0513

Organism

Bacillus pumilus (strain SAFR-032) [Complete proteome] [HAMAP]

Taxonomic identifier

315750 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	433 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8FAE1 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: 05FC3AF2D144B2EA	FASTA	433	49,585
	10 20 30 40 50 60 MTIQIYVVKR GDTLNEIAMR FKTTVNEIIR TNDIETPNQL VIGQTIVIPI RGQFYEVKQN 70 80 90 100 110 120 DTLYQIGRRF RISVEELARV NRIRPEAILP IRFLLYIPQR PKRNINSNAY IEPRGNQVSE 130 140 150 160 170 180 NLKQAAREAS PYLTHLGAFS FQAQRDGTLK EPPLDQLPQI AAQSRTVLSM VVTNLENDKF 190 200 210 220 230 240 SDELGRILLN NQSVKATFLN EIVRIAKKYQ FKEIHFDFEY LRPADKEAYI QFLREATTRF 250 260 270 280 290 300 HQEGWTISVA LAPKTSSQQK GKWYEAHDYG AIGNIVDHVV LMTYEWGYSG GPAQAVSPIG 310 320 330 340 350 360 PVREVIEYAL TVMPANKIVM GQNLYGYDWT LPYVQGGPIA KAVSPQQAIA IARNNNASIL 370 380 390 400 410 420 YDETAQAPYF RYTDANNKEH EVWFEDARSI QAKFNLIKEL SLNGIAYWKL GLSFPQNWLL 430 LSDQFNIEKR TTS

References

[1]

"Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032." Gioia J., Yerrapragada S., Qin X., Jiang H., Igboeli O.C., Muzny D., Dugan-Rocha S., Ding Y., Hawes A., Liu W., Perez L., Kovar C., Dinh H., Lee S., Nazareth L., Blyth P., Holder M., Buhay C. , Tirumalai M.R., Liu Y., Dasgupta I., Bokhetache L., Fujita M., Karouia F., Eswara Moorthy P., Siefert J., Uzman A., Buzumbo P., Verma A., Zwiya H., McWilliams B.D., Olowu A., Clinkenbeard K.D., Newcombe D., Golebiewski L., Petrosino J.F., Nicholson W.L., Fox G.E., Venkateswaran K., Highlander S.K., Weinstock G.M. PLoS ONE 2:E928-E928(2007) [PubMed: 17895969] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000813 Genomic DNA. Translation: ABV61208.1.
RefSeq	YP_001485768.1. NC_009848.1.
3D structure databases
ProteinModelPortal	A8FAE1.
ModBase	Search...
Protein-protein interaction databases
STRING	A8FAE1.
Protein family/group databases
CAZy	CBM50. Carbohydrate-Binding Module Family 50. GH18. Glycoside Hydrolase Family 18.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBACT00000063088; EBBACP00000061421; EBBACG00000063079.
GeneID	5619755.
GenomeReviews	Gene locus BPUM_0513 in contig CP000813_GR.
KEGG	bpu:BPUM_0513.
PATRIC	18964803. VBIBacPum16546_0523.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3858.
GeneTree	EBGT00050000000551.
HOGENOM	HBG337948.
OMA	WYEAHDY.
ProtClustDB	CLSK873277.
Family and domain databases
InterPro	IPR011583. Chitinase_II. IPR001223. Glyco_hydro18cat. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
KO	K06306.
Pfam	PF00704. Glyco_hydro_18. 1 hit. PF01476. LysM. 2 hits. [Graphical view]
SMART	SM00636. Glyco_18. 1 hit. SM00257. LysM. 2 hits. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8FAE1_BACP2

Accession

Primary (citable) accession number: A8FAE1

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)