A8F908 (A8F908_BACP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonuclease M5 EMBL ABV60725.1
EC=3.1.26.8 EMBL ABV60725.1

Gene names

Name:	rnmV EMBL ABV60725.1
Ordered Locus Names:	BPUM_0025

Organism

Bacillus pumilus (strain SAFR-032) [Complete proteome] [HAMAP]

Taxonomic identifier

315750 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	186 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABV60725.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	ribonuclease M5 activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8F908 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: A8CCC8DAE5ECCF93	FASTA	186	20,690
	10 20 30 40 50 60 MKIKEIIVVE GRDDTARVKM AVDADTIETN GSAIGDTVIQ QVRLAQETRG VIILTDPDFP 70 80 90 100 110 120 GEKIRKTIAE AVPGCKHAFL PKHLAKAKRD KGIGVEHASL DSIRECLAHV HEEMEVTESD 130 140 150 160 170 180 ITLDDLFDAG LIGGESSKRR RERLGVLLNI GYTNAKQLHK RLHMFQITKH DFIAALKTVM QEEADE

References

[1]

"Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032." Gioia J., Yerrapragada S., Qin X., Jiang H., Igboeli O.C., Muzny D., Dugan-Rocha S., Ding Y., Hawes A., Liu W., Perez L., Kovar C., Dinh H., Lee S., Nazareth L., Blyth P., Holder M., Buhay C. , Tirumalai M.R., Liu Y., Dasgupta I., Bokhetache L., Fujita M., Karouia F., Eswara Moorthy P., Siefert J., Uzman A., Buzumbo P., Verma A., Zwiya H., McWilliams B.D., Olowu A., Clinkenbeard K.D., Newcombe D., Golebiewski L., Petrosino J.F., Nicholson W.L., Fox G.E., Venkateswaran K., Highlander S.K., Weinstock G.M. PLoS ONE 2:E928-E928(2007) [PubMed: 17895969] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000813 Genomic DNA. Translation: ABV60725.1.
RefSeq	YP_001485285.1. NC_009848.1.
3D structure databases
ProteinModelPortal	A8F908.
ModBase	Search...
Protein-protein interaction databases
STRING	A8F908.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBACT00000066094; EBBACP00000064427; EBBACG00000066085.
GeneID	5619238.
GenomeReviews	Gene locus BPUM_0025 in contig CP000813_GR.
KEGG	bpu:BPUM_0025.
PATRIC	18963755. VBIBacPum16546_0026.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1658.
GeneTree	EBGT00050000002245.
HOGENOM	HBG304082.
OMA	DTIETRG.
ProtClustDB	CLSK886558.
Family and domain databases
InterPro	IPR004466. PrimaseG-like. IPR006171. Toprim_domain. [Graphical view]
KO	K05985.
Pfam	PF01751. Toprim. 1 hit. [Graphical view]
SMART	SM00493. TOPRIM. 1 hit. [Graphical view]
TIGRFAMs	TIGR00334. 5S_RNA_mat_M5. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8F908_BACP2

Accession

Primary (citable) accession number: A8F908

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)