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A8F2Z1

- SYGA_RICM5

UniProt

A8F2Z1 - SYGA_RICM5

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Protein
Glycine--tRNA ligase alpha subunit
Gene
glyQ, RMA_1337
Organism
Rickettsia massiliae (strain Mtu5)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. glycine-tRNA ligase activity Source: UniProtKB-EC

GO - Biological processi

  1. glycyl-tRNA aminoacylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciRMAS416276:GJD3-1368-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycine--tRNA ligase alpha subunit (EC:6.1.1.14)
Alternative name(s):
Glycyl-tRNA synthetase alpha subunit
Short name:
GlyRS
Gene namesi
Name:glyQ
Ordered Locus Names:RMA_1337
OrganismiRickettsia massiliae (strain Mtu5)
Taxonomic identifieri416276 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000001311: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 288288Glycine--tRNA ligase alpha subunitUniRule annotation
PRO_1000059056Add
BLAST

Interactioni

Subunit structurei

Tetramer of two alpha and two beta subunits By similarity.

Protein-protein interaction databases

STRINGi416276.RMA_1337.

Structurei

3D structure databases

ProteinModelPortaliA8F2Z1.
SMRiA8F2Z1. Positions 4-288.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0752.
HOGENOMiHOG000264291.
KOiK01878.
OMAiIQPLDME.
OrthoDBiEOG661H9S.

Family and domain databases

HAMAPiMF_00254. Gly_tRNA_synth_alpha.
InterProiIPR006194. Gly-tRNA-synth_heterodimer.
IPR002310. Gly-tRNA_ligase_asu.
[Graphical view]
PfamiPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSiPR01044. TRNASYNTHGA.
TIGRFAMsiTIGR00388. glyQ. 1 hit.
PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8F2Z1-1 [UniParc]FASTAAdd to Basket

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MKKLSFQQII LTLQNYWQDY GCAILQPYDA HVGAGTFHPA TVLRCLGTKP    50
WSVAYVQPSR RPGDSRYGMH PNRMQHYYQF QVILKPSPDN IQELYLKSLE 100
CLGIDLKIHD IRFVEDDWES PTLGAAGLGW EVWCNGMEVS QFTYMQQIGG 150
IECRPVAGEI TYGLDRLALY IQGVDEVREL DWNGQVGEKA LKYGEVDFEA 200
ERQFSKYNLE LADSEMLLRH FKDSEDQCER LIKANLPMPA YDECLKASHA 250
FNQLNALGVI SVTERASYVL RVRHLARICC TKWLEMNK 288
Length:288
Mass (Da):33,139
Last modified:November 13, 2007 - v1
Checksum:iCC7BA89CCC2DF1B6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000683 Genomic DNA. Translation: ABV85277.1.
RefSeqiWP_012153238.1. NC_009900.1.
YP_001499824.1. NC_009900.1.

Genome annotation databases

EnsemblBacteriaiABV85277; ABV85277; RMA_1337.
GeneIDi5665700.
KEGGirms:RMA_1337.
PATRICi17897390. VBIRicMas83254_1655.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000683 Genomic DNA. Translation: ABV85277.1 .
RefSeqi WP_012153238.1. NC_009900.1.
YP_001499824.1. NC_009900.1.

3D structure databases

ProteinModelPortali A8F2Z1.
SMRi A8F2Z1. Positions 4-288.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 416276.RMA_1337.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABV85277 ; ABV85277 ; RMA_1337 .
GeneIDi 5665700.
KEGGi rms:RMA_1337.
PATRICi 17897390. VBIRicMas83254_1655.

Phylogenomic databases

eggNOGi COG0752.
HOGENOMi HOG000264291.
KOi K01878.
OMAi IQPLDME.
OrthoDBi EOG661H9S.

Enzyme and pathway databases

BioCyci RMAS416276:GJD3-1368-MONOMER.

Family and domain databases

HAMAPi MF_00254. Gly_tRNA_synth_alpha.
InterProi IPR006194. Gly-tRNA-synth_heterodimer.
IPR002310. Gly-tRNA_ligase_asu.
[Graphical view ]
Pfami PF02091. tRNA-synt_2e. 1 hit.
[Graphical view ]
PRINTSi PR01044. TRNASYNTHGA.
TIGRFAMsi TIGR00388. glyQ. 1 hit.
PROSITEi PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genome."
    Blanc G., Ogata H., Robert C., Audic S., Claverie J.-M., Raoult D.
    Genome Res. 17:1657-1664(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Mtu5.

Entry informationi

Entry nameiSYGA_RICM5
AccessioniPrimary (citable) accession number: A8F2Z1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: November 13, 2007
Last modified: September 3, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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