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A8F2Y7

- A8F2Y7_RICM5

UniProt

A8F2Y7 - A8F2Y7_RICM5

Protein

Pseudouridine synthase

Gene

RMA_1333

Organism
Rickettsia massiliae (strain Mtu5)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (13 Nov 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pseudouridine synthase activity Source: InterPro
    2. RNA binding Source: InterPro

    GO - Biological processi

    1. pseudouridine synthesis Source: InterPro

    Keywords - Molecular functioni

    IsomeraseUniRule annotation

    Enzyme and pathway databases

    BioCyciRMAS416276:GJD3-1364-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
    Gene namesi
    Ordered Locus Names:RMA_1333Imported
    OrganismiRickettsia massiliae (strain Mtu5)Imported
    Taxonomic identifieri416276 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000001311: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi416276.RMA_1333.

    Structurei

    3D structure databases

    ProteinModelPortaliA8F2Y7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the pseudouridine synthase rluA family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0564.
    HOGENOMiHOG000275919.
    KOiK06180.
    OMAiRDIVHGG.
    OrthoDBiEOG6P070X.

    Family and domain databases

    Gene3Di3.10.290.10. 1 hit.
    InterProiIPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view]
    PfamiPF00849. PseudoU_synth_2. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view]
    SMARTiSM00363. S4. 1 hit.
    [Graphical view]
    SUPFAMiSSF55120. SSF55120. 1 hit.
    TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
    PROSITEiPS01129. PSI_RLU. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8F2Y7-1 [UniParc]FASTAAdd to Basket

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    MLKYSVPHEL NDIRLDKALS SLLENVSRNQ IQKAIKDSQV LVNDVIISDP    50
    DVLVKENDII LFSFKEPEEL KIAAANVALD IIYEDDDLIV INKAAGMTVH 100
    PGAGHHDDTL VNALLHHTKN LSDIGSSERP GIVHRLDKDT TGLMVVAKNN 150
    KAHMLLANQI EQRQVIRKYK VLVWGVINPL EGVIKNNIGR SRSDRQKMTI 200
    LKYGGKEAVT HYKTLELFYK GSISMVECKL STGRTHQIRV QLSHLKHSVV 250
    GDQTYGNNDR KIAHSPPELK AKLIDFKRQA LHSWYLSFTH PTSNEIMAFS 300
    CKLPRDMEEI ISL 313
    Length:313
    Mass (Da):35,320
    Last modified:November 13, 2007 - v1
    Checksum:i244F36EFA0F7A431
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000683 Genomic DNA. Translation: ABV85273.1.
    RefSeqiYP_001499820.1. NC_009900.1.

    Genome annotation databases

    EnsemblBacteriaiABV85273; ABV85273; RMA_1333.
    GeneIDi5665707.
    KEGGirms:RMA_1333.
    PATRICi17897370. VBIRicMas83254_1645.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000683 Genomic DNA. Translation: ABV85273.1 .
    RefSeqi YP_001499820.1. NC_009900.1.

    3D structure databases

    ProteinModelPortali A8F2Y7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 416276.RMA_1333.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABV85273 ; ABV85273 ; RMA_1333 .
    GeneIDi 5665707.
    KEGGi rms:RMA_1333.
    PATRICi 17897370. VBIRicMas83254_1645.

    Phylogenomic databases

    eggNOGi COG0564.
    HOGENOMi HOG000275919.
    KOi K06180.
    OMAi RDIVHGG.
    OrthoDBi EOG6P070X.

    Enzyme and pathway databases

    BioCyci RMAS416276:GJD3-1364-MONOMER.

    Family and domain databases

    Gene3Di 3.10.290.10. 1 hit.
    InterProi IPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view ]
    Pfami PF00849. PseudoU_synth_2. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view ]
    SMARTi SM00363. S4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55120. SSF55120. 1 hit.
    TIGRFAMsi TIGR00005. rluA_subfam. 1 hit.
    PROSITEi PS01129. PSI_RLU. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genome."
      Blanc G., Ogata H., Robert C., Audic S., Claverie J.-M., Raoult D.
      Genome Res. 17:1657-1664(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Mtu5Imported.

    Entry informationi

    Entry nameiA8F2Y7_RICM5
    AccessioniPrimary (citable) accession number: A8F2Y7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 13, 2007
    Last sequence update: November 13, 2007
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3