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Protein

Pseudouridine synthase

Gene

RMA_1333

Organism
Rickettsia massiliae (strain Mtu5)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil.UniRule annotation

Catalytic activityi

RNA uridine = RNA pseudouridine.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotation, RNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:RMA_1333Imported
OrganismiRickettsia massiliae (strain Mtu5)Imported
Taxonomic identifieri416276 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
Proteomesi
  • UP000001311 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliA8F2Y7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 73S4 RNA-bindingInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the pseudouridine synthase RluA family.UniRule annotationSAAS annotation

Phylogenomic databases

HOGENOMiHOG000275919
KOiK06180
OMAiAHPSPGW

Family and domain databases

CDDicd02869 PseudoU_synth_RluCD_like, 1 hit
cd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR006225 PsdUridine_synth_RluC/D
IPR006224 PsdUridine_synth_RluC/D_CS
IPR006145 PsdUridine_synth_RsuA/RluD
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
PF01479 S4, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00005 rluA_subfam, 1 hit
PROSITEiView protein in PROSITE
PS01129 PSI_RLU, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

A8F2Y7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKYSVPHEL NDIRLDKALS SLLENVSRNQ IQKAIKDSQV LVNDVIISDP
60 70 80 90 100
DVLVKENDII LFSFKEPEEL KIAAANVALD IIYEDDDLIV INKAAGMTVH
110 120 130 140 150
PGAGHHDDTL VNALLHHTKN LSDIGSSERP GIVHRLDKDT TGLMVVAKNN
160 170 180 190 200
KAHMLLANQI EQRQVIRKYK VLVWGVINPL EGVIKNNIGR SRSDRQKMTI
210 220 230 240 250
LKYGGKEAVT HYKTLELFYK GSISMVECKL STGRTHQIRV QLSHLKHSVV
260 270 280 290 300
GDQTYGNNDR KIAHSPPELK AKLIDFKRQA LHSWYLSFTH PTSNEIMAFS
310
CKLPRDMEEI ISL
Length:313
Mass (Da):35,320
Last modified:November 13, 2007 - v1
Checksum:i244F36EFA0F7A431
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000683 Genomic DNA Translation: ABV85273.1
RefSeqiWP_012153234.1, NC_009900.1

Genome annotation databases

EnsemblBacteriaiABV85273; ABV85273; RMA_1333
KEGGirms:RMA_1333

Similar proteinsi

Entry informationi

Entry nameiA8F2Y7_RICM5
AccessioniPrimary (citable) accession number: A8F2Y7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: April 25, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health