A8F2C1 (A8F2C1_RICM5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S20 HAMAP MF_00500

Gene names

Name:	rpsT HAMAP MF_00500 EMBL ABV85057.1
Ordered Locus Names:	RMA_1014

Organism

Rickettsia massiliae (strain Mtu5) [Complete proteome] [HAMAP] EMBL ABV85057.1

Taxonomic identifier

416276 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group

Protein attributes

Sequence length	95 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 16S ribosomal RNA By similarity. HAMAP MF_00500
Sequence similarities	Belongs to the ribosomal protein S20P family. HAMAP MF_00500

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP MF_00500
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_00500 EMBL ABV85057.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8F2C1 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: 01AF95050A668703	FASTA	95	10,601
	10 20 30 40 50 60 MRDSVMANHS SAKKAARQTV KRTLINKKRS SAIKTFIKKV VHEISLGNKE NANLALSVAQ 70 80 90 SKIMQGVKKN IIKLNTASRK ISRLSRQIKS LNESK

References

[1]	"Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genome." Blanc G., Ogata H., Robert C., Audic S., Claverie J.-M., Raoult D. Genome Res. 17:1657-1664(2007) [PubMed: 17916642] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000683 Genomic DNA. Translation: ABV85057.1.
RefSeq	YP_001499604.1. NC_009900.1.
3D structure databases
ProteinModelPortal	A8F2C1.
ModBase	Search...
Protein-protein interaction databases
STRING	A8F2C1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5666206.
GenomeReviews	Gene locus RMA_1014 in contig CP000683_GR.
KEGG	rms:RMA_1014.
PATRIC	17896598. VBIRicMas83254_1268.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0268.
HOGENOM	HBG734145.
OMA	RTQMRGA.
ProtClustDB	PRK00239.
Enzyme and pathway databases
BioCyc	RMAS416276:RMA_1014-MONOMER.
Family and domain databases
HAMAP	MF_00500. Ribosomal_S20. [Tree]
InterPro	IPR002583. Ribosomal_S20. [Graphical view]
Gene3D	G3DSA:1.20.58.110. Ribosomal_S20. 1 hit.
KO	K02968.
Pfam	PF01649. Ribosomal_S20p. 1 hit. [Graphical view]
ProDom	PD004231. Ribosomal_S20. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF46992. Ribosomal_S20p. 1 hit.
TIGRFAMs	TIGR00029. S20. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8F2C1_RICM5

Accession

Primary (citable) accession number: A8F2C1

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)