A8F1Q2 (A8F1Q2_RICM5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polypeptide deformylase EMBL ABV84838.1

Gene names

Name:	def2 EMBL ABV84838.1
Ordered Locus Names:	RMA_0678

Organism

Rickettsia massiliae (strain Mtu5) [Complete proteome] [HAMAP] EMBL ABV84838.1

Taxonomic identifier

416276 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group

Protein attributes

Sequence length	189 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity

Formyl-L-methionyl peptide + H2O = formate + methionyl peptide. SAAS SAAS000181

Ontologies

Keywords
Biological process	Protein biosynthesis SAAS SAAS000181
Ligand	Metal-binding SAAS SAAS000181
Molecular function	Hydrolase SAAS SAAS000181
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	iron ion binding Inferred from electronic annotation. Source: InterPro peptide deformylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8F1Q2 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: 078A14107D9665A0	FASTA	189	21,717
	10 20 30 40 50 60 MYRSILMNQD KPYYQIVYAP NDIFKKQAEY IDIVDDNIRT IVDKMLQNLH IERAVGLGAN 70 80 90 100 110 120 MVGILKRIAV VDLHENNKSS PIVFINPDIT YFSEEKQTFI EGSLSFPGIE ASITRSKAIK 130 140 150 160 170 180 VKYLDYNGNK QELAAEGFLA TVIQHEIDYL NGKIFLDYLS KLKRDTLLKK MLKHIKLHPP HIHGSGCRH

References

[1]	"Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genome." Blanc G., Ogata H., Robert C., Audic S., Claverie J.-M., Raoult D. Genome Res. 17:1657-1664(2007) [PubMed: 17916642] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000683 Genomic DNA. Translation: ABV84838.1.
RefSeq	YP_001499385.1. NC_009900.1.
3D structure databases
ProteinModelPortal	A8F1Q2.
ModBase	Search...
Protein-protein interaction databases
STRING	A8F1Q2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5665006.
GenomeReviews	Gene locus RMA_0678 in contig CP000683_GR.
KEGG	rms:RMA_0678.
PATRIC	17895705. VBIRicMas83254_0834.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0242.
HOGENOM	HBG665227.
OMA	QHQIDHL.
ProtClustDB	CLSK882046.
Enzyme and pathway databases
BioCyc	RMAS416276:RMA_0678-MONOMER.
Family and domain databases
HAMAP	MF_00163. Pep_deformylase. [Tree]
InterPro	IPR000181. Fmet_deformylase. IPR023635. Peptide_deformylase. [Graphical view]
Gene3D	G3DSA:3.90.45.10. Fmet_deformylase. 1 hit.
KO	K01462.
PANTHER	PTHR10458. Fmet_deformylase. 1 hit.
Pfam	PF01327. Pep_deformylase. 1 hit. [Graphical view]
PIRSF	PIRSF004749. Pep_def. 1 hit.
PRINTS	PR01576. PDEFORMYLASE.
SUPFAM	SSF56420. Fmet_deformylase. 1 hit.
TIGRFAMs	TIGR00079. Pept_deformyl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8F1Q2_RICM5

Accession

Primary (citable) accession number: A8F1Q2

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)