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A8F0I2 (A8F0I2_RICM5) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ompW EMBL ABV84418.1
Ordered Locus Names:RMA_0113
OrganismRickettsia massiliae (strain Mtu5) [Complete proteome] [HAMAP] EMBL ABV84418.1
Taxonomic identifier416276 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length244 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentcell outer membrane

Inferred from electronic annotation. Source: InterPro

integral to membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A8F0I2 [UniParc].

Last modified November 13, 2007. Version 1.
Checksum: 60F268B0DB085FE9

FASTA24426,610
        10         20         30         40         50         60 
MLRIVKKLGI ILFVSSISIN SFAKSMYDDV DSAPDYDSTP YYENEGSLVF KMRLGGVVSS 

        70         80         90        100        110        120 
AKQKGLPTPT SPQPISVGEV AKNGYGGDAS TTIFFNNYLA TELSLGFNVL RTKYTYLAAI 

       130        140        150        160        170        180 
AHNYGVDNVK LGKNKPIYMI PATVTGQFHI APYGGIRPYI GIGYHGSYML TQATGLKIRN 

       190        200        210        220        230        240 
GHGAVGQIGV DFYAKDDTLI NIDVRQFFLN PKLEYKPNLV GNKTVISKVK LNPLIVSIGI 


GFTF 

« Hide

References

[1]"Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genome."
Blanc G., Ogata H., Robert C., Audic S., Claverie J.-M., Raoult D.
Genome Res. 17:1657-1664(2007) [PubMed: 17916642] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000683 Genomic DNA. Translation: ABV84418.1.
RefSeqYP_001498965.1. NC_009900.1.

3D structure databases

ProteinModelPortalA8F0I2.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8F0I2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5665595.
GenomeReviewsGene locus RMA_0113 in contig CP000683_GR.
KEGGrms:RMA_0113.
PATRIC17894328. VBIRicMas83254_0159.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3047.
HOGENOMHBG663968.
OMAVAKNGYG.
ProtClustDBCLSK870733.

Enzyme and pathway databases

BioCycRMAS416276:RMA_0113-MONOMER.

Family and domain databases

InterProIPR011250. OMP_b-brl.
IPR005618. OMPW.
[Graphical view]
Gene3DG3DSA:2.40.160.20. OMP_b-brl. 1 hit.
KOK07275.
PfamPF03922. OmpW. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8F0I2_RICM5
AccessionPrimary (citable) accession number: A8F0I2
Entry history
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)