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A8F0D7 (Y049_RICM5) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0301 protein RMA_0049
Gene names
Ordered Locus Names:RMA_0049
OrganismRickettsia massiliae (strain Mtu5) [Complete proteome] [HAMAP]
Taxonomic identifier416276 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group

Protein attributes

Sequence length189 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0301 (AlgH) family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 189189UPF0301 protein RMA_0049 HAMAP MF_00758
PRO_1000062199

Sequences

Sequence LengthMass (Da)Tools
A8F0D7 [UniParc].

Last modified November 13, 2007. Version 1.
Checksum: E2AD355455690880

FASTA18921,407
        10         20         30         40         50         60 
MGDKIFHNLS GKTLVATPHV ITKGIYHKSL IYMLSHTEEG AIGLIFNRLV NHIDLKSFFK 

        70         80         90        100        110        120 
IKNDKITTPV MVPIYLGGPI EHEKGFFLHS SDYNKNLLLD FHNDLAVSSN LEISEDIAFG 

       130        140        150        160        170        180 
KGPKNSLFIV GYTAWKPGQL EEELEKNLWL VMDCNKEFIF ADNPESKWHN ALKHLGIDEI 


HFSSQIGNA

« Hide

References

[1]"Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genome."
Blanc G., Ogata H., Robert C., Audic S., Claverie J.-M., Raoult D.
Genome Res. 17:1657-1664(2007) [PubMed: 17916642] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Mtu5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000683 Genomic DNA. Translation: ABV84373.1.
RefSeqYP_001498920.1. NC_009900.1.

3D structure databases

ProteinModelPortalA8F0D7.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8F0D7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5665121.
GenomeReviewsGene locus RMA_0049 in contig CP000683_GR.
KEGGrms:RMA_0049.
PATRIC17894174. VBIRicMas83254_0082.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1678.
HOGENOMHBG530212.
OMAGDKIFHN.
ProtClustDBPRK00228.

Enzyme and pathway databases

BioCycRMAS416276:RMA_0049-MONOMER.

Family and domain databases

HAMAPMF_00758. UPF0301.
[Tree]
InterProIPR003774. DUF179.
[Graphical view]
KOK07735.
PfamPF02622. DUF179. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY049_RICM5
AccessionPrimary (citable) accession number: A8F0D7
Entry history
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: November 13, 2007
Last modified: January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

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