Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A8ESN9 (A8ESN9_ARCB4) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=6.5.1.1 EMBL ABV66963.1
Gene names
Name:ligA EMBL ABV66963.1
Ordered Locus Names:Abu_0698 EMBL ABV66963.1
OrganismArcobacter butzleri (strain RM4018) [Complete proteome] [HAMAP] EMBL ABV66963.1
Taxonomic identifier367737 [NCBI]
Taxonomic lineageBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeArcobacter

Protein attributes

Sequence length284 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABV66963.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A8ESN9 [UniParc].

Last modified November 13, 2007. Version 1.
Checksum: 958B2B19E9E4817D

FASTA28433,441
        10         20         30         40         50         60 
MMFFKNIKNI INLFGGLIMK LLLYFFLAIY GFSFELQKAN IYDEKKDNIN NWYMSEKLDG 

        70         80         90        100        110        120 
IRAYWNGKEL LSKNGNKIYA PSWFIQNLPP FELDGELYTK VNDFENIQSI VLDTKPSKAW 

       130        140        150        160        170        180 
EKITYNIFEV PNTKGDFDTR LKRLEDWLKI NPNNFIKIIP QIVCKDKEHL DKFLNQMLKK 

       190        200        210        220        230        240 
QAEGVMIKNP FLEYQEGRNS NILKVKTFFD EEGVVISHNY KNGKFKSLVI KQKDGITFNL 

       250        260        270        280 
GNGFTNKDRE NPPKIGDIVT FKYYGLTKNN KPKFASFLRV RKEE 

« Hide

References

[1]"The complete genome sequence and analysis of the Epsilonproteobacterium Arcobacter butzleri."
Miller W.G., Parker C.T., Rubenfield M., Mendz G.L., Wosten M.M., Ussery D.W., Stolz J.F., Binnewies T.T., Hallin P.F., Wang G., Malek J.A., Rogosin A., Stanker L.H., Mandrell R.E.
PLoS ONE 2:E1358-E1358(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RM4018 EMBL ABV66963.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000361 Genomic DNA. Translation: ABV66963.1.
RefSeqYP_001489632.1. NC_009850.1.

3D structure databases

ProteinModelPortalA8ESN9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING367737.Abu_0698.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABV66963; ABV66963; Abu_0698.
GeneID5623548.
KEGGabu:Abu_0698.
PATRIC20962760. VBIArcBut20197_0685.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000293070.
KOK01971.
OMAVRGYWDG.
OrthoDBEOG60919Q.
ProtClustDBPRK09125.

Enzyme and pathway databases

BioCycABUT367737:GHWO-696-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8ESN9_ARCB4
AccessionPrimary (citable) accession number: A8ESN9
Entry history
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: January 22, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)