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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ligA

Organism
Arcobacter butzleri (strain RM4018)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciABUT367737:GHWO-696-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligAImported
Ordered Locus Names:Abu_0698Imported
OrganismiArcobacter butzleri (strain RM4018)Imported
Taxonomic identifieri367737 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesCampylobacteraceaeArcobacter
ProteomesiUP000001136: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi367737.Abu_0698.

Structurei

3D structure databases

ProteinModelPortaliA8ESN9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8ESN9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMFFKNIKNI INLFGGLIMK LLLYFFLAIY GFSFELQKAN IYDEKKDNIN
60 70 80 90 100
NWYMSEKLDG IRAYWNGKEL LSKNGNKIYA PSWFIQNLPP FELDGELYTK
110 120 130 140 150
VNDFENIQSI VLDTKPSKAW EKITYNIFEV PNTKGDFDTR LKRLEDWLKI
160 170 180 190 200
NPNNFIKIIP QIVCKDKEHL DKFLNQMLKK QAEGVMIKNP FLEYQEGRNS
210 220 230 240 250
NILKVKTFFD EEGVVISHNY KNGKFKSLVI KQKDGITFNL GNGFTNKDRE
260 270 280
NPPKIGDIVT FKYYGLTKNN KPKFASFLRV RKEE
Length:284
Mass (Da):33,441
Last modified:November 13, 2007 - v1
Checksum:i958B2B19E9E4817D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000361 Genomic DNA. Translation: ABV66963.1.
RefSeqiWP_012012466.1. NC_009850.1.
YP_001489632.1. NC_009850.1.

Genome annotation databases

EnsemblBacteriaiABV66963; ABV66963; Abu_0698.
GeneIDi5623548.
KEGGiabu:Abu_0698.
PATRICi20962760. VBIArcBut20197_0685.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000361 Genomic DNA. Translation: ABV66963.1.
RefSeqiWP_012012466.1. NC_009850.1.
YP_001489632.1. NC_009850.1.

3D structure databases

ProteinModelPortaliA8ESN9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi367737.Abu_0698.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABV66963; ABV66963; Abu_0698.
GeneIDi5623548.
KEGGiabu:Abu_0698.
PATRICi20962760. VBIArcBut20197_0685.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiEOG60919Q.

Enzyme and pathway databases

BioCyciABUT367737:GHWO-696-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RM4018Imported.

Entry informationi

Entry nameiA8ESN9_ARCB4
AccessioniPrimary (citable) accession number: A8ESN9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: March 4, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.