A8DYQ1 (YTHA_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein YthA

Gene names

Name:	ythA
Ordered Locus Names:	b4655, JW5769.1

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	41 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Subcellular location	Cell membrane; Single-pass membrane protein Potential.
Induction	Constitutively expressed (at protein level). Ref.3

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Transmembrane Transmembrane helix
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 41	41	Uncharacterized protein YthA		PRO_0000315218
Regions
	Transmembrane	10 – 32	23	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	A8DYQ1 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: 5107FB6F565FFEC6	FASTA	41	4,779
	10 20 30 40 MIKNFIFDNL IILAVPFMIK TSLKTNLIFF FLCVFVPHMA S

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[2]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]	"Small membrane proteins found by comparative genomics and ribosome binding site models." Hemm M.R., Paul B.J., Schneider T.D., Storz G., Rudd K.E. Mol. Microbiol. 70:1487-1501(2008) [PubMed] [Europe PMC] [Abstract] Cited for: INDUCTION. Strain: K12 / MG1655 / ATCC 47076.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00096 Genomic DNA. Translation: ABV59575.1. AP009048 Genomic DNA. No translation available.
RefSeq	YP_001491548.1. NC_000913.2.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	511145.b4655.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABV59575; ABV59575; b4655.
GeneID	5625581.
KEGG	eco:b4655.
Organism-specific databases
EcoGene	EG14464. ythA.
Phylogenomic databases
ProtClustDB	CLSK2505922.
Enzyme and pathway databases
BioCyc	EcoCyc:MONOMER0-2840.
Gene expression databases
Genevestigator	A8DYQ1.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

YTHA_ECOLI

Accession

Primary (citable) accession number: A8DYQ1

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	November 13, 2007
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program