A8DVW7 (A8DVW7_NEMVE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EDO25641.1

Gene names

ORF Names:

v1g156832

Organism

Nematostella vectensis (Starlet sea anemone)

Taxonomic identifier

45351 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Cnidaria › Anthozoa › Hexacorallia › Actiniaria › Edwardsiidae › Nematostella

Protein attributes

Sequence length	207 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S4P family. RuleBase RU003699 Contains 1 S4 RNA-binding domain. RuleBase RU003699

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU003699
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EDO25641.1

Sequences

	Sequence		Length	Mass (Da)
	A8DVW7 [UniParc]. Last modified November 13, 2007. Version 1. Checksum: C6A08E02D0A0B97B	FASTA	207	23,172
	10 20 30 40 50 60 VARYIGPKAK LSRREGTDLF LKSARRSIAD KSKFDTKPGQ HGRTSGQRTS DFGLQLREKQ 70 80 90 100 110 120 KVKRMYGVLE KQFRRYFEAA DKKKGNTGAN LLSLLESRLD NVVYRMGFGS TRSEARQLVS 130 140 150 160 170 180 HKAITVNGQS VNIPSYMVKV GDVVAVREKS KKQARIVEAL QLAGQVGFPA WVEVSADKAE 190 200 GTFKKSPDRD EFGADINESL IVELYSR

References

[1]

"Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization." Putnam N.H., Srivastava M., Hellsten U., Dirks B., Chapman J., Salamov A., Terry A., Shapiro H., Lindquist E., Kapitonov V.V., Jurka J., Genikhovich G., Grigoriev I.V., Lucas S.M., Steele R.E., Finnerty J.R., Technau U., Martindale M.Q., Rokhsar D.S. Science 317:86-94(2007) [PubMed: 17615350] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CH2 X CH6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS478733 Genomic DNA. Translation: EDO25641.1.
RefSeq	XP_001617741.1. XM_001617691.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A8DVW7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	NEMVEDRAFT_v1g156832-RA; NEMVEDRAFT_v1g156832-PA; NEMVEDRAFT_v1g156832.
GeneID	5495911.
KEGG	nve:NEMVE_v1g156832.
Phylogenomic databases
OMA	QLVVELY.
Family and domain databases
HAMAP	MF_01306_B. Ribosomal_S4_B. [Tree]
InterPro	IPR022801. Ribosomal_S4/S9. IPR001912. Ribosomal_S4/S9_N. IPR005709. Ribosomal_S4_bac-type. IPR018079. Ribosomal_S4_CS. IPR002942. S4_RNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.1050.10. G3DSA:1.10.1050.10. 1 hit. G3DSA:3.10.290.10. G3DSA:3.10.290.10. 1 hit.
PANTHER	PTHR11831. Ribosomal_S4. 1 hit.
Pfam	PF00163. Ribosomal_S4. 1 hit. PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
TIGRFAMs	TIGR01017. RpsD_bact. 1 hit.
PROSITE	PS00632. RIBOSOMAL_S4. 1 hit. PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8DVW7_NEMVE

Accession

Primary (citable) accession number: A8DVW7

Entry history

Integrated into UniProtKB/TrEMBL:	November 13, 2007
Last sequence update:	November 13, 2007
Last modified:	November 16, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)