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Protein

Protein PB1-F2

Gene

PB1

Organism
Influenza A virus (strain A/Swine/Wisconsin/1/1967 H1N1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

May play an important role in promoting lung pathology in both primary viral infection and secondary bacterial infection.UniRule annotation

Miscellaneous

A stop codon is present at position 12 leading to a truncated form of PB1-F2.

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Protein PB1-F2UniRule annotation
Gene namesi
Name:PB1UniRule annotation
Synonyms:PB1-F2
OrganismiInfluenza A virus (strain A/Swine/Wisconsin/1/1967 H1N1)
Taxonomic identifieri382855 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA negative-strand virusesOrthomyxoviridaeInfluenzavirus A
Virus hostiAves [TaxID: 8782]
Homo sapiens (Human) [TaxID: 9606]
Sus scrofa (Pig) [TaxID: 9823]
Proteomesi
  • UP000116872 Componenti: Genome

Subcellular locationi

  • Host nucleus UniRule annotation
  • Host cytoplasmhost cytosol UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Host cytoplasm, Host nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003730211 – 11Protein PB1-F2Add BLAST11

Family & Domainsi

Sequence similaritiesi

Belongs to the influenza viruses PB1-F2 family.UniRule annotation

Family and domain databases

HAMAPiMF_04064. INFV_PB1F2. 1 hit.

Sequencei

Sequence statusi: Complete.

Length:11
Mass (Da):1,317
Last modified:October 13, 2009 - v2
Checksum:i6222875E71AAB6DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CY026297 Viral cRNA. Translation: ABV82593.1. Sequence problems.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CY026297 Viral cRNA. Translation: ABV82593.1. Sequence problems.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

HAMAPiMF_04064. INFV_PB1F2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiPB1F2_I67A2
AccessioniPrimary (citable) accession number: A8C8X2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: October 13, 2009
Last modified: June 7, 2017
This is version 16 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.