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Protein
Submitted name:

Ribose 5-phosphate isomerase

Gene

GL50803_27614

Organism
Giardia intestinalis (strain ATCC 50803 / WB clone C6) (Giardia lamblia)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. ribose-5-phosphate isomerase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. pentose-phosphate shunt Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ribose 5-phosphate isomeraseImported (EC:5.3.1.6Imported)
Gene namesi
ORF Names:GL50803_27614Imported
OrganismiGiardia intestinalis (strain ATCC 50803 / WB clone C6) (Giardia lamblia)Imported
Taxonomic identifieri184922 [NCBI]
Taxonomic lineageiEukaryotaDiplomonadidaHexamitidaeGiardiinaeGiardia
ProteomesiUP000001548 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiGiardiaDB:GL50803_27614.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3S5PX-ray2.30A/B1-145[»]
ProteinModelPortaliA8B2K2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiA8B2K2.
KOiK01808.
OMAiHDVYSAK.

Family and domain databases

Gene3Di3.40.1400.10. 1 hit.
InterProiIPR004785. RpiB.
IPR003500. RpiB_LacA_LacB.
[Graphical view]
PANTHERiPTHR30345. PTHR30345. 1 hit.
PfamiPF02502. LacAB_rpiB. 1 hit.
[Graphical view]
PIRSFiPIRSF005384. RpiB_LacA_B. 1 hit.
SUPFAMiSSF89623. SSF89623. 1 hit.
TIGRFAMsiTIGR01120. rpiB. 1 hit.
TIGR00689. rpiB_lacA_lacB. 1 hit.

Sequencei

Sequence statusi: Complete.

A8B2K2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVAFASDHG GRDLRMFLQQ RASAHGYEVM DLGTESDASV DYPDFAKIGC
60 70 80 90 100
EAVTSGRADC CILVCGTGIG ISIAANKMKG IRCALCSTEY DAEMARKHNN
110 120 130 140
ANALALGGRT TGPEVAASIL SRFLSTNFEG GRHAARIAKI SAMEE
Length:145
Mass (Da):15,349
Last modified:November 13, 2007 - v1
Checksum:iD629E3DBD494E116
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACB02000001 Genomic DNA. Translation: EDO82317.1.
RefSeqiXP_001709991.1. XM_001709939.1.

Genome annotation databases

EnsemblProtistsiEDO82317; EDO82317; GL50803_27614.
GeneIDi5702915.
KEGGigla:GL50803_27614.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACB02000001 Genomic DNA. Translation: EDO82317.1.
RefSeqiXP_001709991.1. XM_001709939.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3S5PX-ray2.30A/B1-145[»]
ProteinModelPortaliA8B2K2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiEDO82317; EDO82317; GL50803_27614.
GeneIDi5702915.
KEGGigla:GL50803_27614.

Organism-specific databases

EuPathDBiGiardiaDB:GL50803_27614.

Phylogenomic databases

InParanoidiA8B2K2.
KOiK01808.
OMAiHDVYSAK.

Family and domain databases

Gene3Di3.40.1400.10. 1 hit.
InterProiIPR004785. RpiB.
IPR003500. RpiB_LacA_LacB.
[Graphical view]
PANTHERiPTHR30345. PTHR30345. 1 hit.
PfamiPF02502. LacAB_rpiB. 1 hit.
[Graphical view]
PIRSFiPIRSF005384. RpiB_LacA_B. 1 hit.
SUPFAMiSSF89623. SSF89623. 1 hit.
TIGRFAMsiTIGR01120. rpiB. 1 hit.
TIGR00689. rpiB_lacA_lacB. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 50803 / WB clone C6Imported.
  2. "Crystal structure of ribose-5-phosphate isomerase B RpiB from Giardia lamblia."
    Seattle Structural Genomics Center for Infectious Disease (SSGCID)
    Edwards T.E., Abendroth J.
    Submitted (MAY-2011) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS).

Entry informationi

Entry nameiA8B2K2_GIAIC
AccessioniPrimary (citable) accession number: A8B2K2
Entry historyi
Integrated into UniProtKB/TrEMBL: November 13, 2007
Last sequence update: November 13, 2007
Last modified: March 4, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.