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A8AVE0 (A8AVE0_STRGC) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Aspartate--tRNA ligase 1 HAMAP MF_00044
EC=6.1.1.12 HAMAP MF_00044
Alternative name(s):
Aspartyl-tRNA synthetase 1 HAMAP MF_00044
Gene names
Name:aspS-2 EMBL ABV10832.1
Synonyms:aspS1 HAMAP MF_00044
Ordered Locus Names:SGO_0434
OrganismStreptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) [Complete proteome] [HAMAP]
Taxonomic identifier29390 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Lactobacillales › Streptococcaceae › Streptococcus

Protein attributes

Sequence length578 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp). HAMAP MF_00044

Subunit structure

Homodimer By similarity. HAMAP MF_00044

Subcellular location

Cytoplasm By similarity HAMAP MF_00044.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00044

Sequences

Sequence LengthMass (Da)Tools
A8AVE0 [UniParc].

Last modified October 23, 2007. Version 1.
Checksum: 336544B6A6459796

FASTA57866,062
        10         20         30         40         50         60 
MKEIFIGNYG LEQVGQTMTA QGWVANIRNH GKLAFIELRD REGLLQVFVG GEIEDFAKLE 

        70         80         90        100        110        120 
EIGKEDLIAV TGQVVQREER FVNKAIKSGQ VELRAEKIEV IASSKALPFE LDQHAHTGED 

       130        140        150        160        170        180 
LRQKYRYLDL RREKMTHNLK LRHQVTSTIR EYLNGLDFLE VETPYLTKST PEGARDFLVP 

       190        200        210        220        230        240 
SRVYKNQFYA LPQSPQMLKQ LLMGAGLERY YQIVRCFRDE DLRGDRQPEF TQVDLELSFA 

       250        260        270        280        290        300 
SEEEIRALVE AMLKAVVKTT HGLELTEAFP TISYEEAMSR FGSDKPDTRF GLELKSLTDL 

       310        320        330        340        350        360 
CQSNESLLIK KALDNQEEVM GICVPDAASA FSKKQLSHYY QEMKEFGCSR FASLKVENGQ 

       370        380        390        400        410        420 
LVGDLASTFE AESQELLTRF EAKDGDLILL VMAKKHRAQE ALGHLRLEVA KALDLIDPSL 

       430        440        450        460        470        480 
LHFLWVVDWP LLEWNEDQNR YQAMHHPFTQ GIFEEGQEPG QFRSHAYDIV LNGYEIGGGS 

       490        500        510        520        530        540 
LRIHDRKAQE AMFELLGMSR EDYERDFGFF LEALEYGFPP HGGLALGLDR LVMILTGEQN 

       550        560        570 
IRQVIAFPKN GTGFDPMLES PSLVDQRQVK ELHLELKK

« Hide

References

[1]"Genome-wide transcriptional changes in Streptococcus gordonii in response to competence signaling peptide."
Vickerman M.M., Iobst S., Jesionowski A.M., Gill S.R.
J. Bacteriol. 189:7799-7807(2007) [PubMed: 17720781] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Challis EMBL ABV10832.1.
[2]Gill S.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Challis EMBL ABV10832.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000725 Genomic DNA. Translation: ABV10832.1.
RefSeqYP_001449750.1. NC_009785.1.

3D structure databases

ProteinModelPortalA8AVE0.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBSTRT00000011060; EBSTRP00000010617; EBSTRG00000011060.
GeneID5598431.
GenomeReviewsGene locus SGO_0434 in contig CP000725_GR.
KEGGsgo:SGO_0434.
PATRIC19658833. VBIStrGor124371_0437.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000027607.
HOGENOMHBG396032.
OMALHFLWVV.
ProtClustDBPRK00476.

Enzyme and pathway databases

BioCycSGOR29390:SGO_0434-MONOMER.

Family and domain databases

HAMAPMF_00044_B. Asp_tRNA_synth_B.
[Tree]
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004524. Asp-tRNA-synth_IIb_bac/mt.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR004115. GAD_dom.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
IPR004365. NA-bd_OB_tRNA-helicase.
[Graphical view]
Gene3DG3DSA:3.30.1360.30. GAD_dom. 1 hit.
G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KOK01876.
PANTHERPTHR22594. aa-tRNA-synt_II. 1 hit.
PTHR22594:SF5. AspS_bac. 1 hit.
PfamPF02938. GAD. 1 hit.
PF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti. 1 hit.
[Graphical view]
PRINTSPR01042. TRNASYNTHASP.
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
SSF55261. SSF55261. 1 hit.
TIGRFAMsTIGR00459. AspS_bact. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8AVE0_STRGC
AccessionPrimary (citable) accession number: A8AVE0
Entry history
Integrated into UniProtKB/TrEMBL: October 23, 2007
Last sequence update: October 23, 2007
Last modified: January 25, 2012
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info