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A8ALN9 (ARAB_CITK8) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribulokinase
EC=2.7.1.16
Gene names
Name:araB
Ordered Locus Names:CKO_03319
OrganismCitrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) [Complete proteome] [HAMAP]
Taxonomic identifier290338 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Citrobacter

Protein attributes

Sequence length569 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate. HAMAP MF_00520

Pathway

Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 2/3. HAMAP MF_00520

Sequence similarities

Belongs to the ribulokinase family.

Ontologies

Keywords
   Biological processArabinose catabolism
Carbohydrate metabolism
   LigandATP-binding
Nucleotide-binding
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processL-arabinose catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

ribulokinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 569569Ribulokinase HAMAP MF_00520
PRO_1000050909

Sequences

Sequence LengthMass (Da)Tools
A8ALN9 [UniParc].

Last modified October 23, 2007. Version 1.
Checksum: 32ED7360E1292ACD

FASTA56961,598
        10         20         30         40         50         60 
MAIAIGLDFG SDSVRALAVD CATGEEIATC VEWYPRWQEG CYCDAPNNQF RHHPRDYIES 

        70         80         90        100        110        120 
MEAALKNVLT TLSASQRGEV VGIGVDSTGS TPAPIDVDGH VLALRPEFAE NPNAMFVLWK 

       130        140        150        160        170        180 
DHTSVEEAEA ITRLCHTPGK TDYSRYIGGI YSSEWFWAKI LHVTRQDSAV AQAAASWIEL 

       190        200        210        220        230        240 
CDWVPALLSG TTRPQDIRRG RCSAGHKSLW HESWGGLPPA SFFDDLDPII NRHLAWPLFT 

       250        260        270        280        290        300 
DTFTADLPVG TLCAEWAQRL GLPESVVISG GAFDCHMGAV GAGAQPNALV KVIGTSTCDI 

       310        320        330        340        350        360 
LIADKQSVGD RAVKGICGQV DGSVVPDFIG LEAGQSAFGD IYAWFGRILG WPLEQLAAQH 

       370        380        390        400        410        420 
PELKDQIAIS QKQLLPTLTE AWAKNPSLDH LPVVLDWFNG RRTPNANQRL KGVISDLNLA 

       430        440        450        460        470        480 
TDAPALFGGL IAATAFGARA IQECFTEQGI AVNNVMALGG IARKNQVIMQ ACCDVLNRPL 

       490        500        510        520        530        540 
QIVASDQCCA LGAAIFAAVA AKAHVDIPAA QQKMASAVEN TLQPRPEQAQ RFEQLYQRYR 

       550        560 
QWAVSAEQHY LPTATPAPKT PVSQATLTH

« Hide

References

[1]The Citrobacter koseri Genome Sequencing Project
McClelland M., Sanderson E.K., Porwollik S., Spieth J., Clifton W.S., Latreille P., Courtney L., Wang C., Pepin K., Bhonagiri V., Nash W., Johnson M., Thiruvilangam P., Wilson R.
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-895 / CDC 4225-83 / SGSC4696.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000822 Genomic DNA. Translation: ABV14402.1.
RefSeqYP_001454838.1. NC_009792.1.

3D structure databases

ProteinModelPortalA8ALN9.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8ALN9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5581636.
GenomeReviewsGene locus CKO_03319 in contig CP000822_GR.
KEGGcko:CKO_03319.
PATRIC20389208. VBICitKos71230_2782.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1069.
HOGENOMHBG312681.
OMANGRRTPD.
ProtClustDBPRK04123.

Family and domain databases

HAMAPMF_00520. Ribulokinase.
[Tree]
InterProIPR000577. Carb_kinase_FGGY.
IPR018485. Carb_kinase_FGGY_C.
IPR005929. L_ribulokin.
[Graphical view]
KOK00853.
PANTHERPTHR10196. FGGY_kin. 1 hit.
PfamPF02782. FGGY_C. 1 hit.
[Graphical view]
TIGRFAMsTIGR01234. L-ribulokinase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameARAB_CITK8
AccessionPrimary (citable) accession number: A8ALN9
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 23, 2007
Last modified: January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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