Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP dependent DNA ligase

Gene

Igni_1251

Organism
Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciIHOS453591:GHYN-1286-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Igni_1251Imported
OrganismiIgnicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)Imported
Taxonomic identifieri453591 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeIgnicoccus
ProteomesiUP000000262: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi453591.Igni_1251.

Structurei

3D structure databases

ProteinModelPortaliA8ABX5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

A8ABX5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEYKGAKYIH LKKGKWGGKG SVIIYYKGDV GVVPGYPSIQ RLVLLSKVPH
60 70 80 90 100
YFPEGVSVEE KMNGYNVRVV KVGGEVFAVT RGGYLCPYTN ARLKSVYGEE
110 120 130 140 150
LSSLLDELPP GSFVAGEVVG TENPYVRVEY PEAPKFDYFI FDIFVREGDG
160 170 180 190 200
WRQMPVEERH ELVRRHGLRG VRLLGTFRPD ESVSKIKEIV DRFDAEGREG
210 220 230 240 250
VVLKDPLYKR PPAKYTGSFT NIGDIEQGMK YPFDEGKDYL FPRIVREMFK
260 270 280 290 300
VFEEGLAGRK LEERALWLGR AILAPAVEAV KAVAEGRPLH EDFVLRFPTE
310 320 330 340 350
GDLEDYLDYV RQLGVKVTVL EKWEEGGWVV VKVRKFKRSP DVIESMLRTG

RTPLD
Length:355
Mass (Da):40,407
Last modified:October 23, 2007 - v1
Checksum:i7FFCB9C6201FFA1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000816 Genomic DNA. Translation: ABU82427.1.
RefSeqiYP_001435834.1. NC_009776.1.

Genome annotation databases

EnsemblBacteriaiABU82427; ABU82427; Igni_1251.
GeneIDi5562799.
KEGGiiho:Igni_1251.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000816 Genomic DNA. Translation: ABU82427.1.
RefSeqiYP_001435834.1. NC_009776.1.

3D structure databases

ProteinModelPortaliA8ABX5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi453591.Igni_1251.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABU82427; ABU82427; Igni_1251.
GeneIDi5562799.
KEGGiiho:Igni_1251.

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Enzyme and pathway databases

BioCyciIHOS453591:GHYN-1286-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KIN4/I / DSM 18386 / JCM 14125Imported.

Entry informationi

Entry nameiA8ABX5_IGNH4
AccessioniPrimary (citable) accession number: A8ABX5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 23, 2007
Last sequence update: October 23, 2007
Last modified: January 7, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.