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Protein

30S ribosomal protein S11

Gene

rps11

Organism
Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Located on the platform of the 30S subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S11UniRule annotation
Gene namesi
Name:rps11UniRule annotation
Ordered Locus Names:Igni_0182
OrganismiIgnicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
Taxonomic identifieri453591 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeIgnicoccus
Proteomesi
  • UP000000262 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003233481 – 13030S ribosomal protein S11Add BLAST130

Proteomic databases

PRIDEiA8A8W4.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi453591.Igni_0182.

Structurei

3D structure databases

ProteinModelPortaliA8A8W4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S11P family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04240. Archaea.
COG0100. LUCA.
HOGENOMiHOG000111598.
KOiK02948.
OMAiKWGVAHI.

Family and domain databases

Gene3Di3.30.420.80. 1 hit.
HAMAPiMF_01310. Ribosomal_S11. 1 hit.
InterProiIPR001971. Ribosomal_S11.
IPR019961. Ribosomal_S11_archaeal.
IPR018102. Ribosomal_S11_CS.
[Graphical view]
PANTHERiPTHR11759. PTHR11759. 1 hit.
PfamiPF00411. Ribosomal_S11. 1 hit.
[Graphical view]
PIRSFiPIRSF002131. Ribosomal_S11. 1 hit.
TIGRFAMsiTIGR03628. arch_S11P. 1 hit.
PROSITEiPS00054. RIBOSOMAL_S11. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8A8W4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKEIRWGVA HIFSSPNNTF VHITDITGSE TASRVTGGMV VKADHEKPSP
60 70 80 90 100
YAAMIAAARA AQQAMERGIT AIHIKVRAPG GYGPKTPGPG AQAAIRALAR
110 120 130
SGFIIGRIED VTPLPHDTIR RPGGRRGRRV
Length:130
Mass (Da):13,855
Last modified:October 23, 2007 - v1
Checksum:i7AE8EF34C60C8C33
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000816 Genomic DNA. Translation: ABU81366.1.
RefSeqiWP_011998218.1. NC_009776.1.

Genome annotation databases

EnsemblBacteriaiABU81366; ABU81366; Igni_0182.
GeneIDi5562265.
KEGGiiho:Igni_0182.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000816 Genomic DNA. Translation: ABU81366.1.
RefSeqiWP_011998218.1. NC_009776.1.

3D structure databases

ProteinModelPortaliA8A8W4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi453591.Igni_0182.

Proteomic databases

PRIDEiA8A8W4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABU81366; ABU81366; Igni_0182.
GeneIDi5562265.
KEGGiiho:Igni_0182.

Phylogenomic databases

eggNOGiarCOG04240. Archaea.
COG0100. LUCA.
HOGENOMiHOG000111598.
KOiK02948.
OMAiKWGVAHI.

Family and domain databases

Gene3Di3.30.420.80. 1 hit.
HAMAPiMF_01310. Ribosomal_S11. 1 hit.
InterProiIPR001971. Ribosomal_S11.
IPR019961. Ribosomal_S11_archaeal.
IPR018102. Ribosomal_S11_CS.
[Graphical view]
PANTHERiPTHR11759. PTHR11759. 1 hit.
PfamiPF00411. Ribosomal_S11. 1 hit.
[Graphical view]
PIRSFiPIRSF002131. Ribosomal_S11. 1 hit.
TIGRFAMsiTIGR03628. arch_S11P. 1 hit.
PROSITEiPS00054. RIBOSOMAL_S11. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS11_IGNH4
AccessioniPrimary (citable) accession number: A8A8W4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: October 23, 2007
Last modified: November 2, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.