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Protein

30S ribosomal protein S11

Gene

rps11

Organism
Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Located on the platform of the 30S subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S11UniRule annotation
Gene namesi
Name:rps11UniRule annotation
Ordered Locus Names:Igni_0182
OrganismiIgnicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
Taxonomic identifieri453591 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeIgnicoccus
Proteomesi
  • UP000000262 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003233481 – 13030S ribosomal protein S11Add BLAST130

Proteomic databases

PRIDEiA8A8W4.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi453591.Igni_0182.

Structurei

3D structure databases

ProteinModelPortaliA8A8W4.
SMRiA8A8W4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS11 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04240. Archaea.
COG0100. LUCA.
HOGENOMiHOG000111598.
KOiK02948.
OMAiKVYVKGP.
OrthoDBiPOG093Z0JMU.

Family and domain databases

Gene3Di3.30.420.80. 1 hit.
HAMAPiMF_01310. Ribosomal_S11. 1 hit.
InterProiView protein in InterPro
IPR001971. Ribosomal_S11.
IPR019961. Ribosomal_S11_archaeal.
IPR018102. Ribosomal_S11_CS.
PANTHERiPTHR11759. PTHR11759. 1 hit.
PfamiView protein in Pfam
PF00411. Ribosomal_S11. 1 hit.
PIRSFiPIRSF002131. Ribosomal_S11. 1 hit.
TIGRFAMsiTIGR03628. arch_S11P. 1 hit.
PROSITEiView protein in PROSITE
PS00054. RIBOSOMAL_S11. 1 hit.

Sequencei

Sequence statusi: Complete.

A8A8W4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKEIRWGVA HIFSSPNNTF VHITDITGSE TASRVTGGMV VKADHEKPSP
60 70 80 90 100
YAAMIAAARA AQQAMERGIT AIHIKVRAPG GYGPKTPGPG AQAAIRALAR
110 120 130
SGFIIGRIED VTPLPHDTIR RPGGRRGRRV
Length:130
Mass (Da):13,855
Last modified:October 23, 2007 - v1
Checksum:i7AE8EF34C60C8C33
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000816 Genomic DNA. Translation: ABU81366.1.
RefSeqiWP_011998218.1. NC_009776.1.

Genome annotation databases

EnsemblBacteriaiABU81366; ABU81366; Igni_0182.
GeneIDi5562265.
KEGGiiho:Igni_0182.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS11_IGNH4
AccessioniPrimary (citable) accession number: A8A8W4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: October 23, 2007
Last modified: June 7, 2017
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families