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A8A1C9

- A8A1C9_ECOHS

UniProt

A8A1C9 - A8A1C9_ECOHS

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Protein
Submitted name: Alpha-amylase, cytoplasmic
Gene
amyA, EcHS_A2027
Organism
Escherichia coli O9:H4 (strain HS)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciECOL331112:GHHI-2018-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylase, cytoplasmicImported (EC:3.2.1.1Imported)
Gene namesi
Name:amyAImported
Ordered Locus Names:EcHS_A2027Imported
OrganismiEscherichia coli O9:H4 (strain HS)Imported
Taxonomic identifieri331112 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000001123: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi331112.EcHS_A2027.

Structurei

3D structure databases

ProteinModelPortaliA8A1C9.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiRATKYGD.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

A8A1C9-1 [UniParc]FASTAAdd to Basket

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MRNPTLLQCF HWYYPEGGKL WPELAERADG FNDIGINMVW LPPAYKGASG    50
GYSVGYDSYD LFDLGEFDQK GSIPTKYGDK AQLLAAIDAL KRNDIAVLLD 100
VVVNHKMGAD EKEAIRVQRV NADDRTQIDE EIIECEGWTR YTFPARAGQY 150
SQFIWDFKCF SGIDHIENPD EDGIFKIVND YTGEGWNDQV DDELGNFDYL 200
MGENIDFRNH AVTEEIKYWA RWVMEQTQCD GFRLDAVKHI PAWFYKEWIE 250
HVQEVAPKPL FIVAEYWSHE VDKLQTYIDQ VEGKTMLFDA PLQMKFHEAS 300
RMGRDYDMTQ IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL 350
AYALILLREN GVPSVFYPDL YGAHYEDVGG DGQTYPIDMP IIEQLDELIL 400
ARQRFAHGVQ TLFFDHPNCI AFSRSGTDEY PGCVVVMSNG DDGEKTIHLG 450
ENYGNKTWRD FLGNRQESVV TDENGEATFF CNGGSVSVWV IEEVI 495
Length:495
Mass (Da):56,586
Last modified:October 23, 2007 - v1
Checksum:i26BD74E87F49C4D6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000802 Genomic DNA. Translation: ABV06333.1.
RefSeqiYP_001458716.1. NC_009800.1.

Genome annotation databases

EnsemblBacteriaiABV06333; ABV06333; EcHS_A2027.
GeneIDi5593820.
KEGGiecx:EcHS_A2027.
PATRICi18314030. VBIEscCol77814_1984.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000802 Genomic DNA. Translation: ABV06333.1 .
RefSeqi YP_001458716.1. NC_009800.1.

3D structure databases

ProteinModelPortali A8A1C9.
ModBasei Search...

Protein-protein interaction databases

STRINGi 331112.EcHS_A2027.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABV06333 ; ABV06333 ; EcHS_A2027 .
GeneIDi 5593820.
KEGGi ecx:EcHS_A2027.
PATRICi 18314030. VBIEscCol77814_1984.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000094847.
KOi K01176.
OMAi RATKYGD.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci ECOL331112:GHHI-2018-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates."
    Rasko D.A., Rosovitz M.J., Myers G.S., Mongodin E.F., Fricke W.F., Gajer P., Crabtree J., Sebaihia M., Thomson N.R., Chaudhuri R., Henderson I.R., Sperandio V., Ravel J.
    J. Bacteriol. 190:6881-6893(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HSImported.

Entry informationi

Entry nameiA8A1C9_ECOHS
AccessioniPrimary (citable) accession number: A8A1C9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 23, 2007
Last sequence update: October 23, 2007
Last modified: May 14, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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