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A7ZTS6 (A7ZTS6_ECO24) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:EcE24377A_4230
OrganismEscherichia coli O139:H28 (strain E24377A / ETEC) [Complete proteome] [HAMAP] EMBL ABV18371.1
Taxonomic identifier331111 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A7ZTS6 [UniParc].

Last modified October 23, 2007. Version 1.
Checksum: D99A3A52223F3EFE

FASTA46452,608
        10         20         30         40         50         60 
MKAFPETFLW GGATAANQVE GAWQEDGKGI STSDLQPHGV MGKMEPRILG KENIKDVAID 

        70         80         90        100        110        120 
FYHRYPEDIA LFAEMGFTCL RISIAWARIF PQGDEVEPNE AGLAFYDRLF DEMAQAGIKP 

       130        140        150        160        170        180 
LVTLSHYEMP YGLVKNYGGW ANRAVIDHFE HYARTVFTRY QHKVALWLTF NEINISLHEP 

       190        200        210        220        230        240 
FTGVGLAEES GEAEVYQAIH HQLVASARAV KACHSLLPEA KIGNMLLGGL VYPLTCQPQD 

       250        260        270        280        290        300 
MLQAMEENRR WMFFGDVQAR GQYPGYMQRF FRDHNITIEM TESDAEDLKH TVDFISFSYY 

       310        320        330        340        350        360 
MTGCVSHDES INKNAQGNIL NMIPNPHLKS SEWGWQIDPV GLRVLLNTLW DRYQKPLFIV 

       370        380        390        400        410        420 
ENGLGAKDSV EADGSIQDDY RIAYLNDHLV QVNEAITDGV DIMGYTSWGP IDLVSASHSQ 

       430        440        450        460 
MSKRYGFIYV DRDDNGEGSL TRTRKKSFGW YAEVIKTRGL SLKK 

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References

[1]"The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates."
Rasko D.A., Rosovitz M.J., Myers G.S.A., Mongodin E.F., Fricke W.F., Gajer P., Crabtree J., Sebaihia M., Thomson N.R., Chaudhuri R., Henderson I.R., Sperandio V., Ravel J.
J. Bacteriol. 190:6881-6893(2008) [PubMed: 18676672] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000800 Genomic DNA. Translation: ABV18371.1.
RefSeqYP_001465205.1. NC_009801.1.

3D structure databases

ProteinModelPortalA7ZTS6.
ModBaseSearch...

Protein-protein interaction databases

STRINGA7ZTS6.

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000020556; EBESCP00000019618; EBESCG00000019610.
GeneID5590178.
GenomeReviewsGene locus EcE24377A_4230 in contig CP000800_GR.
KEGGecw:EcE24377A_4230.
NMPDRfig|331111.3.peg.1870.
PATRIC18297730. VBIEscCol31211_4468.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2723.
GeneTreeEBGT00050000010166.
HOGENOMHBG316462.
OMAFKCLRTS.
ProtClustDBCLSK891820.

Family and domain databases

InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK01223.
PANTHERPTHR10353. Glyco_hydro_1. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA7ZTS6_ECO24
AccessionPrimary (citable) accession number: A7ZTS6
Entry history
Integrated into UniProtKB/TrEMBL: October 23, 2007
Last sequence update: October 23, 2007
Last modified: January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)