A7ZRF0 (A7ZRF0_ECO24) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-galactosidase EMBL ABV20016.1
EC=3.2.1.22 EMBL ABV20016.1

Gene names

Name:	rafA EMBL ABV20016.1
Ordered Locus Names:	EcE24377A_3380

Organism

Escherichia coli O139:H28 (strain E24377A / ETEC) [Complete proteome] [HAMAP] EMBL ABV20016.1

Taxonomic identifier

331111 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	708 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABV20016.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	raffinose alpha-galactosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A7ZRF0 [UniParc]. Last modified October 23, 2007. Version 1. Checksum: AD9D7D1DB18E1214	FASTA	708	81,138
	10 20 30 40 50 60 MVSKYCRLSS PRSDLIIKTR PHAEIIWWGS ALKHFSPDDC ASLERPVANG RLDIDTPLTL 70 80 90 100 110 120 MAENALGLFS SPGLEGHRNG LDASPVFYTV DVEHTENTLR LTSEDSVAGL RLVSELVMTP 130 140 150 160 170 180 SGILKVRHAL TNLREGDWQI NRFAITLPLA ERAEEVMAFH GRWTREFQPH RVRLTHDAFV 190 200 210 220 230 240 LENRRGRTSH EHFPALIVGT PGFSEQQGEV WAVHLGWSGN HRMRCEAKTD GRRYVQAEAL 250 260 270 280 290 300 WMPGEKALRK NETLYTPWLY ACHSADGLNG MSQQYHRFLR DEIIRFPEQK PRPVHLNTWE 310 320 330 340 350 360 GIYFNHNPDY IMQMAERAAA LGVERFIIDD GWFKGRNDDR AALGDWYTDE QKYPNGLMPV 370 380 390 400 410 420 IKHVKSLGME FGIWVEPEMI NPDSDLFRLH PDWVLSMPGY SQPTGRYQYV LNLNIPEAFA 430 440 450 460 470 480 YIYERFLWLL GEHPVDYVKW DMNRELVQAG HEGRAAADAQ TRQFYRLLDL LRERFPHVEF 490 500 510 520 530 540 ESCASGGGRI DFEVLKRTHR FWASDNNDAL ERCTIQRGMS YFFPPEVMGA HIGHRRCHAT 550 560 570 580 590 600 FRQHSIAFRG LTALFGHMGL ELDPVAADAK ESDGYRRYAL LYKEWRQLIH TGVLWRVDMP 610 620 630 640 650 660 DPSIQVQGVV SPDQSQALFM ISQLAMPDYT LPGILRFPGL AAEVRYRLRV IDHPDLQVVG 670 680 690 700 EGGHTMRKLP VWMNQSLEAS GEWLAQGGIQ LPVLDPESAI LIALERAV

References

[1]

"The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates." Rasko D.A., Rosovitz M.J., Myers G.S.A., Mongodin E.F., Fricke W.F., Gajer P., Crabtree J., Sebaihia M., Thomson N.R., Chaudhuri R., Henderson I.R., Sperandio V., Ravel J. J. Bacteriol. 190:6881-6893(2008) [PubMed: 18676672] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000800 Genomic DNA. Translation: ABV20016.1.
RefSeq	YP_001464379.1. NC_009801.1.
3D structure databases
ProteinModelPortal	A7ZRF0.
ModBase	Search...
Protein-protein interaction databases
STRING	A7ZRF0.
Protein family/group databases
CAZy	GH36. Glycoside Hydrolase Family 36.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000019341; EBESCP00000018403; EBESCG00000018395.
GeneID	5589615.
GenomeReviews	Gene locus EcE24377A_3380 in contig CP000800_GR.
KEGG	ecw:EcE24377A_3380.
NMPDR	fig|331111.3.peg.1072.
PATRIC	18296078. VBIEscCol31211_3654.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3345.
GeneTree	EBGT00050000013654.
HOGENOM	HBG299823.
OMA	TPWLYAS.
ProtClustDB	CLSK888896.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR002252. Glyco_hydro_36. IPR000111. Glyco_hydro_GHD. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K07407.
Pfam	PF02065. Melibiase. 1 hit. [Graphical view]
PIRSF	PIRSF005536. Agal. 1 hit.
PRINTS	PR00743. GLHYDRLASE36.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00512. ALPHA_GALACTOSIDASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A7ZRF0_ECO24

Accession

Primary (citable) accession number: A7ZRF0

Entry history

Integrated into UniProtKB/TrEMBL:	October 23, 2007
Last sequence update:	October 23, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)