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A7ZJ01 (A7ZJ01_ECO24) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.8.3.10 EMBL ABV18428.1
EC=4.1.3.6 EMBL ABV18428.1
Gene names
Name:citF EMBL ABV18428.1
Ordered Locus Names:EcE24377A_0637
OrganismEscherichia coli O139:H28 (strain E24377A / ETEC) [Complete proteome] [HAMAP] EMBL ABV18428.1
Taxonomic identifier331111 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length510 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A7ZJ01 [UniParc].

Last modified October 23, 2007. Version 1.
Checksum: D787C0AC34DB3D53

FASTA51055,191
        10         20         30         40         50         60 
MTQKIEQSQR QERVAAWNRR AECDLAAFQN SPKQTYQAEK ARDRKLCANL EEAIRRSGLQ 

        70         80         90        100        110        120 
DGMTVSFHHA FRGGDLTVNM VMDVIAKMGF KNLTLASSSL SDCHAPLVEH IRQGVVTRIY 

       130        140        150        160        170        180 
TSGLRGPLAE EISRGLLAEP VQIHSHGGRV HLVQSGELNI DVAFLGVPSC DEFGNANGYT 

       190        200        210        220        230        240 
GKACCGSLGY AMVDADNAKQ VVMLTEELLP YPHNPASIEQ DQVDLIVKVD RVGDAAKIGA 

       250        260        270        280        290        300 
GATRMTTNPR ELLIARSAAD VIVNSGYFKE GFSMQTGTGG ASLAVTRFLE DKMRSRDIRA 

       310        320        330        340        350        360 
DFALGGITAT MVDLHEKGLI RKLLDVQSFD SHAAQSLARN PNHIEISANQ YANWGSKGAS 

       370        380        390        400        410        420 
VDRLDVVVLS ALEIDTQFNV NVLTGSDGVL RGASGGHCDT AIASALSIIV APLVRGRIPT 

       430        440        450        460        470        480 
LVDNVLTCIT PGSSVDILVT DHGIAVNPAR PELAERLQEA GIKVVSIEWL RERARLLTGE 

       490        500        510 
PQPIEFTDRV VAVVRYRDGS VIDVVHQVKE 

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References

[1]"The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates."
Rasko D.A., Rosovitz M.J., Myers G.S.A., Mongodin E.F., Fricke W.F., Gajer P., Crabtree J., Sebaihia M., Thomson N.R., Chaudhuri R., Henderson I.R., Sperandio V., Ravel J.
J. Bacteriol. 190:6881-6893(2008) [PubMed: 18676672] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000800 Genomic DNA. Translation: ABV18428.1.
RefSeqYP_001461780.1. NC_009801.1.

3D structure databases

ProteinModelPortalA7ZJ01.
SMRA7ZJ01. Positions 30-509.
ModBaseSearch...

Protein-protein interaction databases

STRINGA7ZJ01.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000019771; EBESCP00000018833; EBESCG00000018825.
GeneID5587439.
GenomeReviewsGene locus EcE24377A_0637 in contig CP000800_GR.
KEGGecw:EcE24377A_0637.
PATRIC18290528. VBIEscCol31211_0943.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3051.
GeneTreeEBGT00050000009608.
HOGENOMHBG297040.
OMAKGSVINQ.
ProtClustDBCLSK874113.

Family and domain databases

InterProIPR006472. Citrate_lyase_asu.
[Graphical view]
KOK01643.
PfamPF04223. CitF. 1 hit.
[Graphical view]
PIRSFPIRSF009451. Citrt_lyas_alpha. 1 hit.
TIGRFAMsTIGR01584. CitF. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7ZJ01_ECO24
AccessionPrimary (citable) accession number: A7ZJ01
Entry history
Integrated into UniProtKB/TrEMBL: October 23, 2007
Last sequence update: October 23, 2007
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)