Reviewed, UniProtKB/Swiss-Prot A7ZD34 (HEM1_CAMC1)

Names and origin

Protein names

Recommended name:
    Glutamyl-tRNA reductase
      Short name=GluTR
    EC=1.2.1.70

Gene names

Name:	hemA
Ordered Locus Names:	Ccon26_08200
ORF Names:	CCC13826_1051

Organism

Campylobacter concisus (strain 13826) [Complete proteome] [HAMAP]

Taxonomic identifier

360104 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Campylobacteraceae › Campylobacter

Protein attributes

Sequence length	427 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA) By similarity.
Catalytic activity	L-glutamate 1-semialdehyde + NADP(+) + tRNA(Glu) = L-glutamyl-tRNA(Glu) + NADPH.
Pathway	Porphyrin metabolism; protoporphyrin-IX biosynthesis; 5-aminolevulinate from L-glutamyl-tRNA(Glu): step 1/2.
Subunit structure	Homodimer By similarity.
Domain	Possesses an unusual extended V-shaped dimeric structure with each monomer consisting of three distinct domains arranged along a curved 'spinal' alpha-helix. The N-terminal catalytic domain specifically recognizes the glutamate moiety of the substrate. The second domain is the NADPH-binding domain, and the third C-terminal domain is responsible for dimerization By similarity.
Miscellaneous	During catalysis, the active site Cys acts as a nucleophile attacking the alpha-carbonyl group of tRNA-bound glutamate with the formation of a thioester intermediate between enzyme and glutamate, and the concomitant release of tRNA(Glu). The thioester intermediate is finally reduced by direct hydride transfer from NADPH, to form the product GSA By similarity.
Sequence similarities	Belongs to the glutamyl-tRNA reductase family.

Ontologies

Keywords
Biological process	Porphyrin biosynthesis
Ligand	NADP
Molecular function	Oxidoreductase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	oxidation reduction Inferred from electronic annotation. Source: UniProtKB-KW porphyrin biosynthetic process Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	NADP binding Inferred from electronic annotation. Source: InterPro glutamyl-tRNA reductase activity Inferred from electronic annotation. Source: HAMAP shikimate 5-dehydrogenase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 427	427	Glutamyl-tRNA reductase		PRO_1000071246
Regions
	Nucleotide binding	190 – 195	6	NADP By similarity
	Region	50 – 53	4	Substrate binding By similarity
	Region	115 – 117	3	Substrate binding By similarity
Sites
	Active site	51	1	Nucleophile By similarity
	Binding site	110	1	Substrate By similarity
	Binding site	121	1	Substrate By similarity
	Site	100	1	Important for activity By similarity

Sequences

	Sequence		Length	Mass (Da)
	A7ZD34-1 [UniParc]. Last modified October 23, 2007. Version 1. Checksum: 618EE0892BDB953A	FASTA	427	47,802
	10 20 30 40 50 60 MHYLDISFTY KNTDISVREK LAFDSDEKKE QILKLINSNK NIKESMVLNT CNRVEIIASV 70 80 90 100 110 120 EDVKAATAHI IRCMSIFSGV FEDELYERAD IYENSGAAHH LFAVASSLDS LVVGETQIVG 130 140 150 160 170 180 QLKNAFKFAY DNNSCGEDIS KIIHYACKCA AKVRNETQIS KNPISVSSVA VAKAKEIFGT 190 200 210 220 230 240 LEGKTAIVVG AGEMGELAAK HLISSGAEVI IINRSSERVE QLVDSLGDNA SWDSILKLKE 250 260 270 280 290 300 YVNNYDLIFS STAAPHAIIT GEIIEPREFH RYFFDIAVPR DIDLLNTELI SVYTVDSLEE 310 320 330 340 350 360 IVRKNLALRE EQAQKAYSIV GQDTSEFLKT LKEDMSVPLI KSIRKQAEIC AKNELEKAIK 370 380 390 400 410 420 KGYLKHSDYD EAQKLIHQVF KAFLHQPTMK LKGLADEERA SELSNGVKFL FDIKDEQNFQ AGDIDEI

References

[1]	"Genome sequence of Campylobacter concisus 13826 isolated from human feces." Fouts D.E., Mongodin E.F., Puiu D., Sebastian Y., Miller W.G., Mandrell R.E., On S., Nelson K.E. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000792 Genomic DNA. Translation: EAT97817.1.
RefSeq	YP_001466692.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	5595979.
GenomeReviews	Gene locus Ccon26_08200 in contig CP000792_GR.
KEGG	cco:CCC13826_1051.
Organism-specific databases
CMR	Search...
Family and domain databases
HAMAP	MF_00087. [Tree]
InterPro	IPR000343. 4pyrrol_synth_GluRdtase. IPR015896. 4pyrrol_synth_GluRdtase_C. IPR015895. 4pyrrol_synth_GluRdtase_N. IPR002198. DHase_sc/Rdtase_SDR. IPR016040. NAD(P)-bd. IPR006151. Shikm_DHase/Glu-tRNA_Rdtase. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PANTHER	PTHR19410. ADH_short_C2. 1 hit.
Pfam	PF00745. GlutR_dimer. 1 hit. PF05201. GlutR_N. 1 hit. PF01488. Shikimate_DH. 1 hit. [Graphical view]
PIRSF	PIRSF000445. 4pyrrol_synth_GluRdtase. 1 hit.
TIGRFAMs	TIGR01035. hemA. 1 hit.
PROSITE	PS00747. GLUTR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

HEM1_CAMC1

Accession

Primary (citable) accession number: A7ZD34

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 26, 2008
Last sequence update:	October 23, 2007
Last modified:	November 25, 2008
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)