Skip Header

Contribute Send feedback
Read comments (?) or add your own

A7Z7G8 (A7Z7G8_BACA2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
L-arabinose isomerase HAMAP MF_00519
EC=5.3.1.4 HAMAP MF_00519
Gene names
Name:araA HAMAP MF_00519 EMBL ABS74944.1
Ordered Locus Names:RBAM_025860
OrganismBacillus amyloliquefaciens (strain FZB42) [Complete proteome] [HAMAP]
Taxonomic identifier326423 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length499 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the conversion of L-arabinose to L-ribulose By similarity. HAMAP MF_00519 SAAS SAAS003762

Catalytic activity

L-arabinose = L-ribulose. HAMAP MF_00519 SAAS SAAS003762

Cofactor

Binds 1 manganese ion per subunit By similarity. HAMAP MF_00519 SAAS SAAS003762

Pathway

Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 1/3. HAMAP MF_00519 SAAS SAAS003762

Sequence similarities

Belongs to the arabinose isomerase family. HAMAP MF_00519

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding3071Manganese By similarity HAMAP MF_00519
Metal binding3321Manganese By similarity HAMAP MF_00519
Metal binding3491Manganese By similarity HAMAP MF_00519
Metal binding4481Manganese By similarity HAMAP MF_00519

Sequences

Sequence LengthMass (Da)Tools
A7Z7G8 [UniParc].

Last modified October 23, 2007. Version 1.
Checksum: C855345451D237E0

FASTA49956,340
        10         20         30         40         50         60 
MNVLQNNEYE FWFVTGSQHL YGEETLQLVD KHAKGICDGL SGVSSRYKIR HKPVVTSSET 

        70         80         90        100        110        120 
IREVLREAQY QENCAGVVTW MHTFSPAKMW IEGLSAFQKP MLHLHTQYHR DIPWETIDMD 

       130        140        150        160        170        180 
FMNSNQSAHG DREYGYIQSR MGQTRKVIAG YWDDEEVKHD ISQWMNTAAA WNESRNIKVA 

       190        200        210        220        230        240 
RFGDNMRNVA VTDGDKVGAH IQFGWQVDGY GIGDLTEVMN NVTDAEIEAL YEEYDKLYVI 

       250        260        270        280        290        300 
SGETKQDEAK VASIKEQAKI ELGLTAFLER GGYTAFSTSF EVLHGMKQLP GLAVQRLMEK 

       310        320        330        340        350        360 
GYGFAGEGDW KTAALVRMMK IMADGEQTSF MEDYTYHFEP GRAMILGSHM LEVCPTIALD 

       370        380        390        400        410        420 
QPKIEVHPLS IGGKEDPARL VFNGIGGSAI IASIIDIGGR FRLILNEAEG REIDHDMPNL 

       430        440        450        460        470        480 
PVARVLWKPE PSLKTAAEAW ILAGGAHHTC MSFRLTAEQM LDWAEMAGIE SIFISRNTEI 

       490 
HELKKELKWN DVLYRLGGN

« Hide

References

[1]"Comparative analysis of the complete genome sequence of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42."
Chen X.H., Koumoutsi A., Scholz R., Eisenreich A., Schneider K., Heinemeyer I., Morgenstern B., Voss B., Hess W.R., Reva O., Junge H., Voigt B., Jungblut P.R., Vater J., Suessmuth R., Liesegang H., Strittmatter A., Gottschalk G., Borriss R.
Nat. Biotechnol. 25:1007-1014(2007) [PubMed: 17704766] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000560 Genomic DNA. Translation: ABS74944.1.
RefSeqYP_001422175.1. NC_009725.1.

3D structure databases

ProteinModelPortalA7Z7G8.
SMRA7Z7G8. Positions 7-496.
ModBaseSearch...

Protein-protein interaction databases

STRINGA7Z7G8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000004611; EBBACP00000004489; EBBACG00000004603.
GeneID5462382.
GenomeReviewsGene locus RBAM_025860 in contig CP000560_GR.
KEGGbay:RBAM_025860.
PATRIC18750300. VBIBacAmy31356_2623.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2160.
GeneTreeEBGT00050000001793.
HOGENOMHBG297198.
OMAEVCPTIA.
ProtClustDBPRK02929.

Family and domain databases

HAMAPMF_00519. Arabinose_Isome.
[Tree]
InterProIPR024664. Ara_Isoase_C.
IPR004216. Fuc/Ara_isomerase_C.
IPR009015. Fucose_isomerase_N/cen.
IPR003762. Lara_isomerase.
[Graphical view]
KOK01804.
PfamPF11762. Arabinose_Iso_C. 1 hit.
PF02610. Arabinose_Isome. 1 hit.
[Graphical view]
PIRSFPIRSF001478. L-ara_isomerase. 1 hit.
ProDomPD018364. Lara_isomerase. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF50443. Fuc_isomerase_C. 1 hit.
SSF53743. Fuc_isomerase_N. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7Z7G8_BACA2
AccessionPrimary (citable) accession number: A7Z7G8
Entry history
Integrated into UniProtKB/TrEMBL: October 23, 2007
Last sequence update: October 23, 2007
Last modified: December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info