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Protein

Superoxide dismutase

Gene

sodF

Organism
Bacillus amyloliquefaciens subsp. plantarum (strain DSM 23117 / BGSC 10A6 / FZB42)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciBAMY326423:GCM4-1906-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodFImported
Ordered Locus Names:RBAM_019080Imported
OrganismiBacillus amyloliquefaciens subsp. plantarum (strain DSM 23117 / BGSC 10A6 / FZB42)Imported
Taxonomic identifieri326423 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000001120 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326423.RBAM_019080.

Structurei

3D structure databases

ProteinModelPortaliA7Z5J4.
SMRiA7Z5J4. Positions 75-275.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013583.
KOiK04564.
OMAiLQYKNER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7Z5J4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRHAYQTEM LNWCETLKEQ VIQQGRFDRF AAQIDRIFHT LQDDGFTEAE
60 70 80 90 100
WYEQASALYR DITEPEEPDE RRAYVPIGKH VLPKLPYSYS ALEPYISREI
110 120 130 140 150
MKLHHTKHHQ SYVDGLNKAE LELKKARQTK QYDLVAHWER QLAFHGAGHY
160 170 180 190 200
LHSIFWFSMN PNGKRRPTGA LFQMIDASFG SYSAFKEQFS QAAKKVEGVG
210 220 230 240 250
WAILVWAPRA GRLEILAAEK HQLYSQWDVI PLLPLDVWEH AYYLQYKNDR
260 270 280
AAYVDQWWNV VDWREAEKRF EQAHRVIWPL Y
Length:281
Mass (Da):33,431
Last modified:October 23, 2007 - v1
Checksum:iAA9D35E4A2DA0205
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000560 Genomic DNA. Translation: ABS74270.1.
RefSeqiWP_012117746.1. NC_009725.1.

Genome annotation databases

EnsemblBacteriaiABS74270; ABS74270; RBAM_019080.
KEGGibay:RBAM_019080.
PATRICi18748892. VBIBacAmy31356_1921.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000560 Genomic DNA. Translation: ABS74270.1.
RefSeqiWP_012117746.1. NC_009725.1.

3D structure databases

ProteinModelPortaliA7Z5J4.
SMRiA7Z5J4. Positions 75-275.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi326423.RBAM_019080.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABS74270; ABS74270; RBAM_019080.
KEGGibay:RBAM_019080.
PATRICi18748892. VBIBacAmy31356_1921.

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013583.
KOiK04564.
OMAiLQYKNER.

Enzyme and pathway databases

BioCyciBAMY326423:GCM4-1906-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 23117 / BGSC 10A6 / FZB42Imported.

Entry informationi

Entry nameiA7Z5J4_BACA2
AccessioniPrimary (citable) accession number: A7Z5J4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 23, 2007
Last sequence update: October 23, 2007
Last modified: July 22, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.