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Protein
Submitted name:

DDX28 protein

Gene

DDX28

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
DDX28 proteinImported
Submitted name:
DEAD-box helicase 28Imported
Gene namesi
Name:DDX28Imported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 18

Organism-specific databases

VGNCiVGNC:27962 DDX28

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_501408411620 – 545Sequence analysisAdd BLAST526

Expressioni

Gene expression databases

BgeeiENSBTAG00000004290

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000005622

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini126 – 156Q_MOTIFInterPro annotationAdd BLAST31
Domaini159 – 351Helicase ATP-bindingInterPro annotationAdd BLAST193
Domaini377 – 536Helicase C-terminalInterPro annotationAdd BLAST160

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi126 – 156Q motifPROSITE-ProRule annotationAdd BLAST31

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG0330 Eukaryota
ENOG410XQU7 LUCA
GeneTreeiENSGT00730000110914
HOGENOMiHOG000008689
HOVERGENiHBG081424
KOiK20096
OMAiLHCIMPH
OrthoDBiEOG091G06DC
TreeFamiTF324977

Family and domain databases

CDDicd00079 HELICc, 1 hit
InterProiView protein in InterPro
IPR011545 DEAD/DEAH_box_helicase_dom
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR014014 RNA_helicase_DEAD_Q_motif
PfamiView protein in Pfam
PF00270 DEAD, 1 hit
PF00271 Helicase_C, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit
PS51195 Q_MOTIF, 1 hit

Sequencei

Sequence statusi: Complete.

A7YWQ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALARQLRLL SLATRLLLAP QRDLTSRGPD EPLPVVRIPR GLQRRQEQRQ
60 70 80 90 100
SGQRSPLRPV LVRPGPLLIS ARRPELNQPA RQTLGRWEAA PLVSRGWKHR
110 120 130 140 150
RARQDYFSIE RAQHEAPALR NLSSKGSFAD LGLEPRVLSA LQEAAPEVVR
160 170 180 190 200
PTTVQSSTIP PLLRGRHILC AAETGSGKTL GYMLPLLQRL LGQPSLYTSR
210 220 230 240 250
IPAPRGLVLV PSRELAEQVR AVAQPLGSSL GLRVQELGGG HGMSRVRLQL
260 270 280 290 300
SKHPPAEVLV ATPGALWKAL KGQLISLAQL SFLVLDEVDT LLDESFLELV
310 320 330 340 350
DYILEKSHIA EGPADLKDPF NPKAQLVLVG ATFPEGVGQL LSKVASLDSL
360 370 380 390 400
TTITSSKLHC IMPHVKQTFM RLKGAEKVTE LVQILKQHDR AHRTGSTGTV
410 420 430 440 450
LVFCNSSSTV NWLGYILDDH KIQHLRLQGQ MPASMRAGIF QSFQKGSRDI
460 470 480 490 500
LLCTDIASRG LDSTQVELVI NYDFPLTLQD YIHRAGRVGR VGSEVPGTVI
510 520 530 540
SFVTHPWDVS LVQKIELAAR RRRSLPGLGS SVSEPLHQET LLQQA
Length:545
Mass (Da):60,001
Last modified:October 23, 2007 - v1
Checksum:i9F35F63031095D3A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02046690 Genomic DNA No translation available.
BC134724 mRNA Translation: AAI34725.1
RefSeqiNP_001098892.1, NM_001105422.2
UniGeneiBt.3066

Genome annotation databases

EnsembliENSBTAT00000005622; ENSBTAP00000005622; ENSBTAG00000004290
GeneIDi539411
KEGGibta:539411

Similar proteinsi

Entry informationi

Entry nameiA7YWQ8_BOVIN
AccessioniPrimary (citable) accession number: A7YWQ8
Entry historyiIntegrated into UniProtKB/TrEMBL: October 23, 2007
Last sequence update: October 23, 2007
Last modified: March 28, 2018
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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