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Protein
Submitted name:

DDX28 protein

Gene

DDX28

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
DDX28 proteinImported
Submitted name:
DEAD-box helicase 28Imported
Gene namesi
Name:DDX28Imported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 18

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_501108653620 – 545Sequence analysisAdd BLAST526

Proteomic databases

PaxDbiA7YWQ8.

Expressioni

Gene expression databases

BgeeiENSBTAG00000004290.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000005622.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini126 – 156Q_MOTIFInterPro annotationAdd BLAST31
Domaini159 – 351Helicase ATP-bindingInterPro annotationAdd BLAST193
Domaini377 – 536Helicase C-terminalInterPro annotationAdd BLAST160

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi126 – 156Q motifPROSITE-ProRule annotationAdd BLAST31

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG0330. Eukaryota.
ENOG410XQU7. LUCA.
GeneTreeiENSGT00730000110914.
HOGENOMiHOG000008689.
HOVERGENiHBG081424.
KOiK20096.
OMAiLHCIMPH.
OrthoDBiEOG091G06DC.
TreeFamiTF324977.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR014014. RNA_helicase_DEAD_Q_motif.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.

Sequencei

Sequence statusi: Complete.

A7YWQ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALARQLRLL SLATRLLLAP QRDLTSRGPD EPLPVVRIPR GLQRRQEQRQ
60 70 80 90 100
SGQRSPLRPV LVRPGPLLIS ARRPELNQPA RQTLGRWEAA PLVSRGWKHR
110 120 130 140 150
RARQDYFSIE RAQHEAPALR NLSSKGSFAD LGLEPRVLSA LQEAAPEVVR
160 170 180 190 200
PTTVQSSTIP PLLRGRHILC AAETGSGKTL GYMLPLLQRL LGQPSLYTSR
210 220 230 240 250
IPAPRGLVLV PSRELAEQVR AVAQPLGSSL GLRVQELGGG HGMSRVRLQL
260 270 280 290 300
SKHPPAEVLV ATPGALWKAL KGQLISLAQL SFLVLDEVDT LLDESFLELV
310 320 330 340 350
DYILEKSHIA EGPADLKDPF NPKAQLVLVG ATFPEGVGQL LSKVASLDSL
360 370 380 390 400
TTITSSKLHC IMPHVKQTFM RLKGAEKVTE LVQILKQHDR AHRTGSTGTV
410 420 430 440 450
LVFCNSSSTV NWLGYILDDH KIQHLRLQGQ MPASMRAGIF QSFQKGSRDI
460 470 480 490 500
LLCTDIASRG LDSTQVELVI NYDFPLTLQD YIHRAGRVGR VGSEVPGTVI
510 520 530 540
SFVTHPWDVS LVQKIELAAR RRRSLPGLGS SVSEPLHQET LLQQA
Length:545
Mass (Da):60,001
Last modified:October 23, 2007 - v1
Checksum:i9F35F63031095D3A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02046690 Genomic DNA. No translation available.
BC134724 mRNA. Translation: AAI34725.1.
RefSeqiNP_001098892.1. NM_001105422.2.
UniGeneiBt.3066.

Genome annotation databases

EnsembliENSBTAT00000005622; ENSBTAP00000005622; ENSBTAG00000004290.
GeneIDi539411.
KEGGibta:539411.

Similar proteinsi

Entry informationi

Entry nameiA7YWQ8_BOVIN
AccessioniPrimary (citable) accession number: A7YWQ8
Entry historyiIntegrated into UniProtKB/TrEMBL: October 23, 2007
Last sequence update: October 23, 2007
Last modified: January 31, 2018
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported