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A7XWN5 (A7XWN5_SV40) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismSimian virus 40 (SV40) EMBL ABU86079.1
Taxonomic identifier10633 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stagePolyomaviridaePolyomavirus
Virus hostMacaca (macaques) [TaxID: 9539]

Protein attributes

Sequence length712 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Contains SF3 helicase domain. SAAS SAAS014015

Contains SFhelicase domain. SAAS SAAS014015

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A7XWN5 [UniParc].

Last modified October 23, 2007. Version 1.
Checksum: 765224F4005D5B55

FASTA71282,037
        10         20         30         40         50         60 
MDKVLNREES LQLMDLLGLE RSAWGNIPLM RKAYLKKCKE FHPDKGGDEE KMKKMNTLYK 

        70         80         90        100        110        120 
KMEDGVKYAH QPDFGGFWDA TEIPTYGTDE WEQWWNAFNE ENLFCSEEMP SSDDEATADS 

       130        140        150        160        170        180 
QHSTPPKKKR KVEDPKDFPS ELLSFLSHAV FSNRTLACFA IYTTKEKAAL LYKKIMEKYS 

       190        200        210        220        230        240 
VTFISRHNSY NHNILFFLTP HRHRVSAINN YAQKLCTFSF LICKGVNKEY LMYSALTRDP 

       250        260        270        280        290        300 
FSVIEESLPG GLKEHDFNPE EAEETKQVSW KLVTEYAMET KCDDVLLLLG MYLEFQYSFE 

       310        320        330        340        350        360 
MCLKCIKKEQ PSHYKYHEKH YANAAIFADS KNQKTICQQA VDTVLAKKRV DSLQLTREQM 

       370        380        390        400        410        420 
LTNRFNDLLD RMDIMFGSTG SADIEEWMAG VAWLHCLLPK MDSVVYDFLK CMVYNIPKKR 

       430        440        450        460        470        480 
YWLFKGPIDS GKTTLAAALL ELCGGKALNV NLPLDRLNFE LGVAIDQFLV VFEDVKGTGG 

       490        500        510        520        530        540 
ESRDLPSGQG INNLDNLRDY LDGSVKVNLE KKHLNKRTQI FPPGIVTMNE YSVPKTLQAR 

       550        560        570        580        590        600 
FVKQIDFRPK DYLKHCLERS EFLLEKRIIQ SGIALLLMLI WYRPVAEFAQ SIQSRIVEWK 

       610        620        630        640        650        660 
ERLDKEFSLS VYQKMKFNVA MGIGVLDWLR NSDDDDDDDS QENADKNEDG GEKNMEDSGH 

       670        680        690        700        710 
ETGIDSQSQG SFQAPQPSQS SQSVHDHNQP YHICRGFTCF KKPPTPPPEP ET 

« Hide

References

[1]"Recovery of strains of the polyomavirus SV40 from rhesus monkey kidney cells dating from the 1950s to the early 1960s."
Peden K., Sheng L., Omeir R., Yacobucci M., Klutch M., Laassri M., Chumakov K., Pal A., Murata H., Lewis A.M.Jr.
Virology 370:63-76(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SV40 EMBL ABU86079.1.
[2]"Crystal structure of rice importin-? and structural basis of its interaction with plant-specific nuclear localization signals."
Chang C.W., Counago R.L., Williams S.J., Boden M., Kobe B.
Plant Cell 24:5074-5088(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.08 ANGSTROMS) OF 125-132.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EF579664 Genomic DNA. Translation: ABU86079.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4B8OX-ray2.08B/C125-132[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D1.10.10.510. 1 hit.
1.10.287.110. 1 hit.
3.40.50.300. 1 hit.
InterProIPR001623. DnaJ_domain.
IPR014015. Helicase_SF3_DNA-vir.
IPR016392. Lg_T_Ag_polyomavir.
IPR010932. Lg_T_Ag_Polyomavir_C.
IPR027417. P-loop_NTPase.
IPR003133. T_Ag_DNA-bd.
IPR017910. Znf_lg_T-Ag_D1-typ.
[Graphical view]
PfamPF00226. DnaJ. 1 hit.
PF06431. Polyoma_lg_T_C. 1 hit.
PF02217. T_Ag_DNA_bind. 1 hit.
[Graphical view]
PIRSFPIRSF003368. Large_T_antigen_polyomaV. 1 hit.
SMARTSM00271. DnaJ. 1 hit.
[Graphical view]
SUPFAMSSF46565. SSF46565. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEPS50076. DNAJ_2. 1 hit.
PS51206. SF3_HELICASE_1. 1 hit.
PS51287. T_AG_OBD. 1 hit.
PS51341. ZF_LTAG_D1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA7XWN5_SV40
AccessionPrimary (citable) accession number: A7XWN5
Entry history
Integrated into UniProtKB/TrEMBL: October 23, 2007
Last sequence update: October 23, 2007
Last modified: April 16, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)