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Protein

Capsid protein

Gene

ORF1

Organism
Torque teno virus (isolate Human/Finland/Hel32/2002) (TTV) (Torque teno virus genotype 6)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Self assemble to form an icosahedral capsid.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Capsid protein
Gene namesi
ORF Names:ORF1
OrganismiTorque teno virus (isolate Human/Finland/Hel32/2002) (TTV) (Torque teno virus genotype 6)
Taxonomic identifieri687342 [NCBI]
Taxonomic lineageiVirusesssDNA virusesAnelloviridaeAlphatorquevirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000008257 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Capsid protein, T=1 icosahedral capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003153281 – 736Capsid proteinAdd BLAST736

Proteomic databases

PRIDEiA7XCE4

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi7 – 66Arg-richAdd BLAST60

Sequence similaritiesi

Phylogenomic databases

OrthoDBiVOG0900003O

Family and domain databases

InterProiView protein in InterPro
IPR004219 TTvirus_Unk
PfamiView protein in Pfam
PF02956 TT_ORF1, 1 hit

Sequencei

Sequence statusi: Complete.

A7XCE4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAWYWWRRRR RRGWWKPRRR RWRRRRARRR GPARRHRARR RVRRRRGRWR
60 70 80 90 100
RRYRRWRRRG GRRRHRKKLI IKQWQPNFIR HCYIIGYMPL IICGENTFSH
110 120 130 140 150
NYATHSDDML STGPYGGGMT TTKFTLRILF DEYQRHLNFW TVSNQDLDLA
160 170 180 190 200
RYLGTKIIFF RHPTVDFVVQ IHTQPPFQDT EITAPSIHPG MLILSKKHIL
210 220 230 240 250
IPSLKTRPSK KHYVKVRVGA PRLFQDKWYP QSELCDVTLL VIYATACDLQ
260 270 280 290 300
YPFGSPQTDN VCVNFQILGQ PYYQHLKTAL GLTEKTTYEN HYKNNLYKKI
310 320 330 340 350
KFYNTTETIA QLKPLVDATT NQTWSHYVNP NKLTTTPTSE ITHNNTWYRG
360 370 380 390 400
NAYNDKITDL PEIVKKSYYK ATELAIPEAV KPTTDLFEYH AGIYSSIFLS
410 420 430 440 450
PGRAYFETPG AYQDIIYNPF TDKGIGNIVW IDWLSKSDAV YSEKQSKCGI
460 470 480 490 500
FDLPLWAAFF GYAEFCSKST GDTAIAYNSR VCVRCPYTEP QLLNHNNPSQ
510 520 530 540 550
GYVFYSYNFG KGKMPGGSSQ VPIRMRWKWY VCMFHQLEVM EAICQSGPFA
560 570 580 590 600
YHSDEKKAVL GIKYKFDWKW GGNPISQQIV RHPCNGQTSS GNRVPRSVQA
610 620 630 640 650
VDPKYVSLQL VWHSWDFRRG LFGQAGIKRM QQESDALTLS PVHRPKRPKR
660 670 680 690 700
DTQVKEKTPE KDSDSAVQLR RLQPWIHSSQ ETKDEEEEIP EGPVQEQLLQ
710 720 730
QLQQQRLLRV QLESIAQEVL KIRRGHSLHP LLSSHA
Length:736
Mass (Da):86,687
Last modified:October 23, 2007 - v1
Checksum:i80F75F0101D9A494
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY666122 Genomic DNA Translation: ABV25035.1
RefSeqiYP_003587868.1, NC_014081.1

Genome annotation databases

GeneIDi9086624
KEGGivg:9086624

Similar proteinsi

Entry informationi

Entry nameiCAPSD_TTVV3
AccessioniPrimary (citable) accession number: A7XCE4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 23, 2007
Last modified: May 23, 2018
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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