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A7TJR5 (A7TJR5_VANPO) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length675 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 F-box domain. RuleBase RU004534

Ontologies

Keywords
   DomainRepeat RuleBase RU003532
WD repeat RuleBase RU000362
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
A7TJR5 [UniParc].

Last modified October 2, 2007. Version 1.
Checksum: F0269A75871353F3

FASTA67575,980
        10         20         30         40         50         60 
MLLQEPDEYP LDDIPMPYRY QIRDGGGLKR SRRCSNGRES ICDESFQLKK SKVVGDDLKL 

        70         80         90        100        110        120 
VDEISSGTGS VSNVTGTGAG TGVGVGVAGS SSNVVDSGIL HEEDALPLSP IPSPSCRVEV 

       130        140        150        160        170        180 
PLDFEDASGA SGACSNELYL ESQTQLPASC FKNLMFRMIA KMNRKELTDI CTLIKDNLKR 

       190        200        210        220        230        240 
DFISCLPLEV SLNILKNLSY EDLVSCLRVS KNWNKLINTT PSIWKQMLLS EDFVSSDNFD 

       250        260        270        280        290        300 
KYSSKLLAKY PDRSTEEDCY RIDFLHNRRI LNNWYNSEFT PKRYTLKGHT ASVVTCLQFE 

       310        320        330        340        350        360 
DEYIITGADD KMIRVYDSVD KRFLLELSGH EGGVWALKYD EDGIIVSGST DRSVRVWDIK 

       370        380        390        400        410        420 
QGRCTHIFKG HTSTVRCLEI VEYKNVKYII TGSRDNTLHV WKLPKPDVER RVDSADGNKL 

       430        440        450        460        470        480 
PFTYNSPDEN PYFVGILRGH MASVRALSGH GNIVISGSYD NSLMVWDIAQ MKCLYILTGH 

       490        500        510        520        530        540 
TDRIYSTVYD HKRKRCISAS MDATIRVWDL KDIWRNGTCT RVMNSLTPCT NIMGSVMILH 

       550        560        570        580        590        600 
GHTALVGLLK LSDKFLVSAA ADGSLRGWNA ENYSRKFLYH HVNMSAITTF DVDDNLLISG 

       610        620        630        640        650        660 
SESQFNIYNL RTGATIHPHI LRDADQIWSV RFKENILVVA VERDGQSFIE IFDFNINNPS 

       670 
SKPPKLPELP TTAHN 

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References

[1]"Independent sorting-out of thousands of duplicated gene pairs in two yeast species descended from a whole-genome duplication."
Scannell D.R., Frank A.C., Conant G.C., Byrne K.P., Woolfit M., Wolfe K.H.
Proc. Natl. Acad. Sci. U.S.A. 104:8397-8402(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 22028 / DSM 70294.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS480403 Genomic DNA. Translation: EDO17494.1.
RefSeqXP_001645352.1. XM_001645302.1.

3D structure databases

ProteinModelPortalA7TJR5.
SMRA7TJR5. Positions 178-655.
ModBaseSearch...

Protein-protein interaction databases

STRING436907.A7TJR5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5545712.
KEGGvpo:Kpol_1058p31.

Phylogenomic databases

eggNOGCOG2319.
KOK03361.
OrthoDBEOG4B2X5M.

Family and domain databases

Gene3D2.130.10.10. 1 hit.
InterProIPR001810. F-box_dom_cyclin-like.
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamPF00400. WD40. 6 hits.
[Graphical view]
PRINTSPR00320. GPROTEINBRPT.
SMARTSM00256. FBOX. 1 hit.
SM00320. WD40. 7 hits.
[Graphical view]
SUPFAMSSF81383. F-box_dom_Skp2-like. 1 hit.
SSF50978. WD40_like. 1 hit.
PROSITEPS50181. FBOX. 1 hit.
PS00678. WD_REPEATS_1. 4 hits.
PS50082. WD_REPEATS_2. 5 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA7TJR5_VANPO
AccessionPrimary (citable) accession number: A7TJR5
Entry history
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: April 3, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)