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A7TGW3 (A7TGW3_VANPO) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length965 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
A7TGW3 [UniParc].

Last modified October 2, 2007. Version 1.
Checksum: 18173392179317B9

FASTA965112,453
        10         20         30         40         50         60 
MRNPTPILVS TNTNTNATFT SKADTNDIEE PHNFSPSPDF KWLCDELFVK LDQIQFRPKE 

        70         80         90        100        110        120 
LNGSKPKYIE YYDIINNFID IWRRTVGNDI YPALILTIPY RDRRMYNIKE SKLIRIVCDY 

       130        140        150        160        170        180 
LKLPKNSETE RRLMRWKHRA DRNVRLSTFC VEEIKKRKGE PREKIKITID KLNECLDNLV 

       190        200        210        220        230        240 
LERGYKGSKS QKISESETFK FCFENMTYVE LKYFFDILLK DKIVGGLEHK FLNCWHPDAQ 

       250        260        270        280        290        300 
DYLSVVSDLK IVSSKLWNPE FRLKYDDLTI NIDHAFTPET AKRLTYSYDT IARRLKNDFF 

       310        320        330        340        350        360 
IEEKMDGERI QLHYMNYGAK LKFLSRRGLD YSYLYGDNRN NGAIGRYLNF HKDVKECILD 

       370        380        390        400        410        420 
GEMVTYDSVK NCILPFGLVK SSAMQSLSVS DIEPDGYHPL YMAFDLVYLN GSSLSTLPLH 

       430        440        450        460        470        480 
QRKNYLDKLL IPCPDFVEIL PALHCNDSSL IKSSLEKAIE LGSEGIILKR FDSQYLVAKR 

       490        500        510        520        530        540 
SDDWIKIKPE YLEQFGENMD LIVIGRDPGK KDSLMCGLIL TGDNEPEEIT SLDSNPTDTA 

       550        560        570        580        590        600 
ESFLKPDKRK IISFCNIANG ISQKEFRDID RYTFGHWIKF DDELPPQDLF EFGTKHPIEW 

       610        620        630        640        650        660 
IYPEHSVVLE IKARSLETNE SARIKYGTGS TLFGGYCRQI RYDKDWVSCF TYNEFMESRN 

       670        680        690        700        710        720 
LKNALVNYPD NKNLIGRKKR PKKRMFNSLT EIFENTKDAP DESNVIFRGL HFYVISDYID 

       730        740        750        760        770        780 
ETDGSRLSKS DLCNLVLEHN GKLVHNPISR IDILNRLRII SMKYTRETTS LIERGYDIIH 

       790        800        810        820        830        840 
PQWILDCISN RKLVRLLPSH CFNVSSSLME VTKTRVDRYG DSYETSLTEK DFEILINRQV 

       850        860        870        880        890        900 
LKSESADKRI TEGENHLKIP ILLFCNRRFF IPETLPSTPI YELKSKVELY GGKLVNKISD 

       910        920        930        940        950        960 
CNVIVFTNTH TENRKEVMKK IRRALVCLDP NSMQVPVLPR IVDANWIDAC ISECVQVPEE 


DYPAV

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References

[1]"Independent sorting-out of thousands of duplicated gene pairs in two yeast species descended from a whole-genome duplication."
Scannell D.R., Frank A.C., Conant G.C., Byrne K.P., Woolfit M., Wolfe K.H.
Proc. Natl. Acad. Sci. U.S.A. 104:8397-8402(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 22028 / DSM 70294.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DS480389 Genomic DNA. Translation: EDO18415.1.
RefSeqXP_001646273.1. XM_001646223.1.

3D structure databases

ProteinModelPortalA7TGW3.
ModBaseSearch...

Protein-protein interaction databases

STRING436907.A7TGW3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5546698.
KEGGvpo:Kpol_1032p7.

Phylogenomic databases

eggNOGCOG1793.
KOK10777.
OrthoDBEOG41K2MD.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF00533. BRCT. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF52113. BRCT. 2 hits.
SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA7TGW3_VANPO
AccessionPrimary (citable) accession number: A7TGW3
Entry history
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: April 3, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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