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A7TDC1 (A7TDC1_NEMVE) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Predicted protein EMBL EDO25931.1
Gene names
ORF Names:v1g155958
OrganismNematostella vectensis (Starlet sea anemone)
Taxonomic identifier45351 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Cnidaria › Anthozoa › Hexacorallia › Actiniaria › Edwardsiidae › Nematostella

Protein attributes

Sequence length246 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular function3-deoxy-8-phosphooctulonate synthase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue2461 EMBL EDO25931.1

Sequences

Sequence LengthMass (Da)Tools
A7TDC1 [UniParc].

Last modified October 2, 2007. Version 1.
Checksum: 4BBF54948B4ED521

FASTA24626,904
        10         20         30         40         50         60 
MNLDNIPQIK HTKSGNFFLL SGPCAIEGEE MAMRIAEKIV TITDKLEIPY VFKGSFKKAN 

        70         80         90        100        110        120 
RSRIDSFTGI GDEKALKILA KVAKEFGVPT VTDIHTNEDA VMAAEYVDIL QIPAFLVRQT 

       130        140        150        160        170        180 
DLVMAAANTG KTVNLKKGQF MSPESMKHAV QKVIDCQNEN VMVTDRGTMF GYQDMIVDYR 

       190        200        210        220        230        240 
GIPTMQEYAT TVLDVTHSLQ QPNQTVGVTG GRPDMIETVA KAGIAVGVDG IFIETHFDPA 


NAKSDG

« Hide

References

[1]"Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization."
Putnam N.H., Srivastava M., Hellsten U., Dirks B., Chapman J., Salamov A., Terry A., Shapiro H., Lindquist E., Kapitonov V.V., Jurka J., Genikhovich G., Grigoriev I.V., Lucas S.M., Steele R.E., Finnerty J.R., Technau U., Martindale M.Q., Rokhsar D.S.
Science 317:86-94(2007) [PubMed: 17615350] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH2 X CH6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DS477579 Genomic DNA. Translation: EDO25931.1.
RefSeqXP_001618031.1. XM_001617981.1.

3D structure databases

ProteinModelPortalA7TDC1.
ModBaseSearch...

Protein-protein interaction databases

STRINGA7TDC1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaNEMVEDRAFT_v1g155958-RA; NEMVEDRAFT_v1g155958-PA; NEMVEDRAFT_v1g155958.
GeneID5496248.
KEGGnve:NEMVE_v1g155958.

Phylogenomic databases

OMAQLILCDR.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
PANTHERPTHR21057:SF2. KDO8P_synthase. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7TDC1_NEMVE
AccessionPrimary (citable) accession number: A7TDC1
Entry history
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: November 16, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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