SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A7SE93

- A7SE93_NEMVE

UniProt

A7SE93 - A7SE93_NEMVE

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

DNA ligase

Gene
v1g230001
Organism
Nematostella vectensis (Starlet sea anemone)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC
  4. zinc ion binding Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:v1g230001Imported
OrganismiNematostella vectensis (Starlet sea anemone)
Taxonomic identifieri45351 [NCBI]
Taxonomic lineageiEukaryotaMetazoaCnidariaAnthozoaHexacoralliaActiniariaEdwardsiidaeNematostella
ProteomesiUP000001593: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi45351.JGI230001.

Structurei

3D structure databases

ProteinModelPortaliA7SE93.
SMRiA7SE93. Positions 1-110.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000007653.
KOiK10776.
OMAiLFSEMKH.
OrthoDBiEOG7BKCT2.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.30.1740.10. 1 hit.
3.40.50.10190. 1 hit.
InterProiIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
IPR001510. Znf_PARP.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF00645. zf-PARP. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
PS00347. PARP_ZN_FINGER_1. 1 hit.
PS50064. PARP_ZN_FINGER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7SE93-1 [UniParc]FASTAAdd to Basket

« Hide

MAEDLKSFLV EYAPQGRAKC KGCKEQIEKS SARIAKLAPN PFSEDGGLMK    50
QWYHVKCIFD SFSRARATTK KIEDAEDLDG FVDMKQDDQN TIKQLISGLS 100
GKKVSPGKKA SQKPTSSPGQ KKVQGTLTFS PTNTSVRPLM TVAGSSKGTV 150
SLLRIKRIAT YLVSQAGRIQ IVTCSNHTAQ IFRRAVAVLR ASDNLSASKA 200
GAESSKDDAF REFRKLCVQL AEEPSYNAKT RLVANLLKKG PSGSGFQGDT 250
TLWVKMLLPA INKRVYNLQS KQLVKLFSQI FCCNYDDMVT HLEEGGDVSE 300
TISNFFTNSI ICKPAKKSNL TLQQVDSFLD RLKLLTKEDD QQRELCSITQ 350
RCTSNDLKYI IRLIKHDLRM NAGAKHVLEA IDPDAYKAFQ ASNDLEDVVK 400
RCLEKHASSG NDRVPGMSKK LSIRASLMTP VKPMLAEACK TFSYAIKKCP 450
KGMLAEIKYD GERVQVHKSG SKFEFFSRSL KPVLPHKVSA FRDFLPKACP 500
HGNNLILDCE VLLVDNKTSL PLPFGTLGIH KKSAFKDANV CLFIFDCLQF 550
NEENVMRKSM TERRKILEEN VTVIPNRIML SETTFVKDEK KLSQLMARAM 600
RDGLEGLVLK DVTGQYEPGK RHWLKMKKDY LEEGSMADTA DLVVLGAYYG 650
TGNKGGLMSV FLMGVFNPRI KKWCTVAKCG NGHDDKTLDK LNRELKVKKI 700
SKDPNRVPVW LEVHRSLIPD FVVDDPKKAP VWEITGAEFS KSTTHTADGI 750
SIRFPRVTRI RDDKDWETAT DLDLLKPVVH LHAPLWPDNH RMRMYNTKNE 800
DEPMDSDETV DNDDVTERKS SAKRKANQIE NDKDEASDRK ELPNVFSGLQ 850
VYVPDTIKDF NKLRRYIIAS RYDGDVVTDK STATHIIANS KVTP 894
Length:894
Mass (Da):100,451
Last modified:October 2, 2007 - v1
Checksum:iA25E5D5D3781C802
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS469635 Genomic DNA. Translation: EDO37995.1.
RefSeqiXP_001630058.1. XM_001630008.1.

Genome annotation databases

EnsemblMetazoaiEDO37995; EDO37995; NEMVEDRAFT_v1g230001.
GeneIDi5509532.
KEGGinve:NEMVE_v1g230001.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS469635 Genomic DNA. Translation: EDO37995.1 .
RefSeqi XP_001630058.1. XM_001630008.1.

3D structure databases

ProteinModelPortali A7SE93.
SMRi A7SE93. Positions 1-110.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 45351.JGI230001.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai EDO37995 ; EDO37995 ; NEMVEDRAFT_v1g230001 .
GeneIDi 5509532.
KEGGi nve:NEMVE_v1g230001.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000007653.
KOi K10776.
OMAi LFSEMKH.
OrthoDBi EOG7BKCT2.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.30.1740.10. 1 hit.
3.40.50.10190. 1 hit.
InterProi IPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
IPR001510. Znf_PARP.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF00645. zf-PARP. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
PS00347. PARP_ZN_FINGER_1. 1 hit.
PS50064. PARP_ZN_FINGER_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CH2 X CH6.

Entry informationi

Entry nameiA7SE93_NEMVE
AccessioniPrimary (citable) accession number: A7SE93
Entry historyi
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: June 11, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3