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A7RHF7 (A7RHF7_NEMVE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Eukaryotic translation initiation factor 6 HAMAP-Rule MF_03132

Short name=eIF-6 HAMAP-Rule MF_03132
Gene names
Name:EIF6 HAMAP-Rule MF_03132
ORF Names:v1g177965 EMBL EDO49340.1
OrganismNematostella vectensis (Starlet sea anemone) [Reference proteome]
Taxonomic identifier45351 [NCBI]
Taxonomic lineageEukaryotaMetazoaCnidariaAnthozoaHexacoralliaActiniariaEdwardsiidaeNematostella

Protein attributes

Sequence length236 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis By similarity. HAMAP-Rule MF_03132

Subunit structure

Monomer. Associates with the 60S ribosomal subunit By similarity. HAMAP-Rule MF_03132

Subcellular location

Cytoplasm. Nucleusnucleolus. Note: Shuttles between cytoplasm and nucleus/nucleolus By similarity. HAMAP-Rule MF_03132

Sequence similarities

Belongs to the eIF-6 family. HAMAP-Rule MF_03132

Sequences

Sequence LengthMass (Da)Tools
A7RHF7 [UniParc].

Last modified October 2, 2007. Version 1.
Checksum: 3114A0397C8F370F

FASTA23625,450
        10         20         30         40         50         60 
MAVRAQFENS NEVGVFSKLT NAYCLVAIGA TENFYSVFES ELSDVIPVVR TSIAGCRIIG 

        70         80         90        100        110        120 
RLCVGNRHGL LVPSTTTDQE LQYIRNALPD QVKIQRVEER LSALGNVIAC NDYVALTHLD 

       130        140        150        160        170        180 
LDMETQEILA DVLKVEVFRQ SLASNVLVGS YCALSNQGGL VHPRTSIEDQ DELSSLLQVP 

       190        200        210        220        230 
LVAGTVNRGS DVIGAGLVVN DWSAFCGSDT TSTELSVIES VFKIGDAQQS SIGDNH 

« Hide

References

[1]"Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization."
Putnam N.H., Srivastava M., Hellsten U., Dirks B., Chapman J., Salamov A., Terry A., Shapiro H., Lindquist E., Kapitonov V.V., Jurka J., Genikhovich G., Grigoriev I.V., Lucas S.M., Steele R.E., Finnerty J.R., Technau U., Martindale M.Q., Rokhsar D.S.
Science 317:86-94(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CH2 X CH6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS469510 Genomic DNA. Translation: EDO49340.1.
RefSeqXP_001641403.1. XM_001641353.1.
UniGeneNve.7378.

3D structure databases

ProteinModelPortalA7RHF7.
SMRA7RHF7. Positions 1-224.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING45351.JGI177965.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaEDO49340; EDO49340; NEMVEDRAFT_v1g177965.
GeneID5521502.
KEGGnve:NEMVE_v1g177965.

Phylogenomic databases

eggNOGCOG1976.
HOGENOMHOG000230605.
KOK03264.
OMANDWCAFT.
OrthoDBEOG7V4B05.

Family and domain databases

HAMAPMF_00032. eIF_6.
InterProIPR002769. eIF6.
[Graphical view]
PANTHERPTHR10784. PTHR10784. 1 hit.
PfamPF01912. eIF-6. 1 hit.
[Graphical view]
PIRSFPIRSF006413. IF-6. 1 hit.
SMARTSM00654. eIF6. 1 hit.
[Graphical view]
TIGRFAMsTIGR00323. eIF-6. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7RHF7_NEMVE
AccessionPrimary (citable) accession number: A7RHF7
Entry history
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: July 9, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)