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A7PW81

- PGIP_VITVI

UniProt

A7PW81 - PGIP_VITVI

Protein

Polygalacturonase inhibitor

Gene

pgip

Organism
Vitis vinifera (Grape)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (02 Oct 2007)
      Previous versions | rss
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    Functioni

    Inhibitor of fungal polygalacturonase. It is an important factor for plant resistance to phytopathogenic fungi.Curated

    GO - Molecular functioni

    1. polygalacturonase inhibitor activity Source: EnsemblPlants/Gramene

    GO - Biological processi

    1. defense response Source: UniProtKB-KW

    Keywords - Biological processi

    Plant defense

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Polygalacturonase inhibitorBy similarity
    Alternative name(s):
    Polygalacturonase-inhibiting proteinImportedBy similarity
    Short name:
    PGIG
    Gene namesi
    Name:pgip
    ORF Names:GSVIVT00025506001, LOC100232865
    OrganismiVitis vinifera (Grape)
    Taxonomic identifieri29760 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis

    Subcellular locationi

    Secretedcell wall By similarity. Membrane By similarity; Peripheral membrane protein By similarity

    GO - Cellular componenti

    1. extracellular region Source: UniProtKB-KW
    2. Golgi apparatus Source: EnsemblPlants/Gramene
    3. membrane Source: UniProtKB-SubCell
    4. plant-type cell wall Source: EnsemblPlants/Gramene
    5. plasmodesma Source: EnsemblPlants/Gramene

    Keywords - Cellular componenti

    Cell wall, Membrane, Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2727Sequence AnalysisAdd
    BLAST
    Chaini28 – 333306Polygalacturonase inhibitorSequence AnalysisPRO_0000363745Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi30 ↔ 60By similarity
    Disulfide bondi61 ↔ 68By similarity
    Glycosylationi109 – 1091N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi133 – 1331N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi147 – 1471N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi157 – 1571N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi241 – 2411N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi294 – 2941N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi301 ↔ 323By similarity
    Disulfide bondi325 ↔ 332By similarity

    Keywords - PTMi

    Disulfide bond, Glycoprotein

    Interactioni

    Protein-protein interaction databases

    STRINGi29760.GSVIVG00025506001.

    Structurei

    3D structure databases

    ProteinModelPortaliA7PW81.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Repeati121 – 14424LRR 1Add
    BLAST
    Repeati147 – 16923LRR 2Add
    BLAST
    Repeati171 – 19222LRR 3Add
    BLAST
    Repeati196 – 21722LRR 4Add
    BLAST
    Repeati219 – 24123LRR 5Add
    BLAST
    Repeati266 – 28823LRR 6Add
    BLAST
    Repeati289 – 31123LRR 7Add
    BLAST

    Sequence similaritiesi

    Belongs to the polygalacturonase-inhibiting protein family.Sequence Analysis
    Contains 7 LRR (leucine-rich) repeats.Curated

    Keywords - Domaini

    Leucine-rich repeat, Repeat, Signal

    Phylogenomic databases

    eggNOGiNOG288515.

    Family and domain databases

    InterProiIPR001611. Leu-rich_rpt.
    IPR013210. LRR-contain_N2.
    [Graphical view]
    PfamiPF00560. LRR_1. 1 hit.
    PF13855. LRR_8. 1 hit.
    PF08263. LRRNT_2. 1 hit.
    [Graphical view]
    PROSITEiPS51450. LRR. 4 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A7PW81-1 [UniParc]FASTAAdd to Basket

    « Hide

    METSKLFLLS SSLLLVLLAT RPCPSLSERC NPKDKKVLLQ IKKALDNPYI    50
    LASWNPNTDC CGWYCVECDL TTHRINSLTI FSGQLSGQIP DAVGDLPFLE 100
    TLIFRKLSNL TGQIPPAIAK LKHLKMVRLS WTNLSGPVPA FFSELKNLTY 150
    LDLSFNNLSG PIPGSLSLLP NLGALHLDRN HLTGPIPDSF GKFAGSTPGL 200
    HLSHNQLSGK IPYSFRGFDP NVMDLSRNKL EGDLSIFFNA NKSTQIVDFS 250
    RNLFQFDLSR VEFPKSLTSL DLSHNKIAGS LPEMMTSLDL QFLNVSYNRL 300
    CGKIPVGGKL QSFDYDSYFH NRCLCGAPLQ SCK 333
    Length:333
    Mass (Da):36,929
    Last modified:October 2, 2007 - v1
    Checksum:i0D4C502A6B93EF2D
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti47 – 471N → T in AAK14075. 1 PublicationCurated
    Sequence conflicti135 – 1351S → F in AAK14075. 1 PublicationCurated
    Sequence conflicti177 – 1771L → I in AAK14075. 1 PublicationCurated
    Sequence conflicti199 – 2013GLH → YLY in AAM74142. 1 PublicationCurated
    Sequence conflicti221 – 2211N → T in AAM74142. 1 PublicationCurated
    Sequence conflicti234 – 2341L → P in AAM74142. 1 PublicationCurated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF305093 mRNA. Translation: AAK14075.1.
    AF499451 Genomic DNA. Translation: AAM74142.1.
    RefSeqiNP_001268106.1. NM_001281177.1.
    UniGeneiVvi.9.

    Genome annotation databases

    GeneIDi100232865.
    KEGGivvi:100232865.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF305093 mRNA. Translation: AAK14075.1 .
    AF499451 Genomic DNA. Translation: AAM74142.1 .
    RefSeqi NP_001268106.1. NM_001281177.1.
    UniGenei Vvi.9.

    3D structure databases

    ProteinModelPortali A7PW81.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 29760.GSVIVG00025506001.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 100232865.
    KEGGi vvi:100232865.

    Phylogenomic databases

    eggNOGi NOG288515.

    Family and domain databases

    InterProi IPR001611. Leu-rich_rpt.
    IPR013210. LRR-contain_N2.
    [Graphical view ]
    Pfami PF00560. LRR_1. 1 hit.
    PF13855. LRR_8. 1 hit.
    PF08263. LRRNT_2. 1 hit.
    [Graphical view ]
    PROSITEi PS51450. LRR. 4 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Molecular cloning of a grapevine gene coding for polygalacturonase inhibiting protein."
      Bezier A., Lambert B., Baillieul F.
      Submitted (SEP-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Chardonnay1 Publication.
      Tissue: LeafImported.
    2. "The isolation and characterization of a gene encoding a polygalacturonase-inhibiting protein (PGIP) from Vitis vinifera L."
      De Ascensao A.R., Pretorius I.S., Bellstedt D.U., Burger J.T., Vivier M.A.
      Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: cv. Pinotage1 Publication.
    3. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
      Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
      , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
      Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Pinot noir / PN400241 Publication.
    4. Almagro L., Belchi-Navarro S., Pedreno M.A.
      Submitted (JUL-2008) to UniProtKB
      Cited for: PROTEIN SEQUENCE OF 172-179.

    Entry informationi

    Entry nameiPGIP_VITVI
    AccessioniPrimary (citable) accession number: A7PW81
    Secondary accession number(s): Q8LKV2, Q9AXP4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 10, 2009
    Last sequence update: October 2, 2007
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Direct protein sequencing

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3