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A7PQW3

- E13B_VITVI

UniProt

A7PQW3 - E13B_VITVI

Protein

Glucan endo-1,3-beta-glucosidase

Gene

VIT_06s0061g00120

Organism
Vitis vinifera (Grape)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 2 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    Implicated in the defense of plants against pathogens.By similarity

    Catalytic activityi

    Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei268 – 2681NucleophileBy similarity
    Active sitei325 – 3251Proton donorBy similarity

    GO - Molecular functioni

    1. glucan endo-1,3-beta-D-glucosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro
    2. defense response Source: UniProtKB-KW
    3. response to biotic stimulus Source: UniProtKB-KW

    Keywords - Molecular functioni

    Glycosidase, Hydrolase, Pathogenesis-related protein

    Keywords - Biological processi

    Plant defense

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glucan endo-1,3-beta-glucosidaseBy similarity (EC:3.2.1.39)
    Alternative name(s):
    (1->3)-beta-glucan endohydrolaseBy similarity
    Short name:
    (1->3)-beta-glucanaseBy similarity
    Beta-1,3-endoglucanaseBy similarity
    Gene namesi
    Ordered Locus Names:VIT_06s0061g00120
    OrganismiVitis vinifera (Grape)
    Taxonomic identifieri29760 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
    ProteomesiUP000009183: Chromosome 6

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2727Sequence AnalysisAdd
    BLAST
    Chaini28 – 344317Glucan endo-1,3-beta-glucosidasePRO_0000363744Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 17 family.Sequence Analysis

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGieuNOG08544.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR000490. Glyco_hydro_17.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF00332. Glyco_hydro_17. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A7PQW3-1 [UniParc]FASTAAdd to Basket

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    MALTRNRPFV VVLLLGFVIM STITIGAQSI GVCYGRNGNN LPSASQVINL    50
    YKSNGIGSMR IYDPNSDTLQ ALRGSDIELI LDVPNTDLQS LASDASAAAT 100
    WVQNNVVNYA SEVKFRYIAV GNEVLPTGSN AQYAQYVLPA MKNVQSAITS 150
    AGLQDQIKVS TATFSAVLGK SYPPSEGSFS DDVSSFINPI ISFLAENGSP 200
    LLANIYPYFS YTGDTQNIRL DYALFTASGV VVQDGSYQYQ NLFDALLDAL 250
    YAALEKAGGS NLKIVVSESG WPSEGGTAAT VDNARTYYKN LINHVKGGTP 300
    RKSGAIETYL FAMFDENQKT GLETEKHFGL FTPGQESKYQ ISFS 344
    Length:344
    Mass (Da):37,093
    Last modified:February 22, 2012 - v2
    Checksum:iFB0E7417F0EB1A72
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN594957 Genomic DNA. Translation: CCB44250.1.
    RefSeqiXP_002278123.1. XM_002278087.2.
    UniGeneiVvi.13874.

    Genome annotation databases

    EnsemblPlantsiVIT_06s0061g00120.t01; VIT_06s0061g00120.t01; VIT_06s0061g00120.
    GeneIDi100265368.
    KEGGivvi:100265368.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN594957 Genomic DNA. Translation: CCB44250.1 .
    RefSeqi XP_002278123.1. XM_002278087.2.
    UniGenei Vvi.13874.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi VIT_06s0061g00120.t01 ; VIT_06s0061g00120.t01 ; VIT_06s0061g00120 .
    GeneIDi 100265368.
    KEGGi vvi:100265368.

    Phylogenomic databases

    eggNOGi euNOG08544.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR000490. Glyco_hydro_17.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF00332. Glyco_hydro_17. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00587. GLYCOSYL_HYDROL_F17. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
      Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
      , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
      Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Pinot noir / PN400241 Publication.
    2. Belchi-Navarro S., Almagro L., Bru R., Pedreno M.A.
      Submitted (JUL-2008) to UniProtKB
      Cited for: PROTEIN SEQUENCE OF 143-158.

    Entry informationi

    Entry nameiE13B_VITVI
    AccessioniPrimary (citable) accession number: A7PQW3
    Secondary accession number(s): F6GWB5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 10, 2009
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 40 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3