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A7PQW3

- E13B_VITVI

UniProt

A7PQW3 - E13B_VITVI

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Protein

Glucan endo-1,3-beta-glucosidase

Gene
VIT_06s0061g00120
Organism
Vitis vinifera (Grape)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Implicated in the defense of plants against pathogens By similarity.By similarity

Catalytic activityi

Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei268 – 2681Nucleophile By similarity
Active sitei325 – 3251Proton donor By similarity

GO - Molecular functioni

  1. glucan endo-1,3-beta-D-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. defense response Source: UniProtKB-KW
  3. response to biotic stimulus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase, Pathogenesis-related protein

Keywords - Biological processi

Plant defense

Names & Taxonomyi

Protein namesi
Recommended name:
Glucan endo-1,3-beta-glucosidase (EC:3.2.1.39)
Alternative name(s):
(1->3)-beta-glucan endohydrolase
Short name:
(1->3)-beta-glucanase
Beta-1,3-endoglucanase
Gene namesi
Ordered Locus Names:VIT_06s0061g00120
OrganismiVitis vinifera (Grape)
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
ProteomesiUP000009183: Chromosome 6

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727 Reviewed predictionAdd
BLAST
Chaini28 – 344317Glucan endo-1,3-beta-glucosidasePRO_0000363744Add
BLAST

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGieuNOG08544.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00332. Glyco_hydro_17. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A7PQW3-1 [UniParc]FASTAAdd to Basket

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MALTRNRPFV VVLLLGFVIM STITIGAQSI GVCYGRNGNN LPSASQVINL    50
YKSNGIGSMR IYDPNSDTLQ ALRGSDIELI LDVPNTDLQS LASDASAAAT 100
WVQNNVVNYA SEVKFRYIAV GNEVLPTGSN AQYAQYVLPA MKNVQSAITS 150
AGLQDQIKVS TATFSAVLGK SYPPSEGSFS DDVSSFINPI ISFLAENGSP 200
LLANIYPYFS YTGDTQNIRL DYALFTASGV VVQDGSYQYQ NLFDALLDAL 250
YAALEKAGGS NLKIVVSESG WPSEGGTAAT VDNARTYYKN LINHVKGGTP 300
RKSGAIETYL FAMFDENQKT GLETEKHFGL FTPGQESKYQ ISFS 344
Length:344
Mass (Da):37,093
Last modified:February 22, 2012 - v2
Checksum:iFB0E7417F0EB1A72
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN594957 Genomic DNA. Translation: CCB44250.1.
RefSeqiXP_002278123.1. XM_002278087.2.
UniGeneiVvi.13874.

Genome annotation databases

EnsemblPlantsiVIT_06s0061g00120.t01; VIT_06s0061g00120.t01; VIT_06s0061g00120.
GeneIDi100265368.
KEGGivvi:100265368.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN594957 Genomic DNA. Translation: CCB44250.1 .
RefSeqi XP_002278123.1. XM_002278087.2.
UniGenei Vvi.13874.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi VIT_06s0061g00120.t01 ; VIT_06s0061g00120.t01 ; VIT_06s0061g00120 .
GeneIDi 100265368.
KEGGi vvi:100265368.

Phylogenomic databases

eggNOGi euNOG08544.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF00332. Glyco_hydro_17. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
    Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
    , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
    Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Pinot noir / PN40024.
  2. Belchi-Navarro S., Almagro L., Bru R., Pedreno M.A.
    Submitted (JUL-2008) to UniProtKB
    Cited for: PROTEIN SEQUENCE OF 143-158.

Entry informationi

Entry nameiE13B_VITVI
AccessioniPrimary (citable) accession number: A7PQW3
Secondary accession number(s): F6GWB5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: February 22, 2012
Last modified: February 19, 2014
This is version 39 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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