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Protein

Glucan endo-1,3-beta-glucosidase

Gene

VIT_06s0061g00120

Organism
Vitis vinifera (Grape)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Implicated in the defense of plants against pathogens.By similarity

Catalytic activityi

Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei268 – 2681NucleophileBy similarity
Active sitei325 – 3251Proton donorBy similarity

GO - Molecular functioni

  1. glucan endo-1,3-beta-D-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. defense response Source: UniProtKB-KW
  3. response to biotic stimulus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase, Pathogenesis-related protein

Keywords - Biological processi

Plant defense

Names & Taxonomyi

Protein namesi
Recommended name:
Glucan endo-1,3-beta-glucosidaseBy similarity (EC:3.2.1.39)
Alternative name(s):
(1->3)-beta-glucan endohydrolaseBy similarity
Short name:
(1->3)-beta-glucanaseBy similarity
Beta-1,3-endoglucanaseBy similarity
Gene namesi
Ordered Locus Names:VIT_06s0061g00120
OrganismiVitis vinifera (Grape)
Taxonomic identifieri29760 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsVitalesVitaceaeVitis
ProteomesiUP000009183: Chromosome 6

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727Sequence AnalysisAdd
BLAST
Chaini28 – 344317Glucan endo-1,3-beta-glucosidasePRO_0000363744Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 17 family.Sequence Analysis

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGieuNOG08544.
InParanoidiA7PQW3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00332. Glyco_hydro_17. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A7PQW3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALTRNRPFV VVLLLGFVIM STITIGAQSI GVCYGRNGNN LPSASQVINL
60 70 80 90 100
YKSNGIGSMR IYDPNSDTLQ ALRGSDIELI LDVPNTDLQS LASDASAAAT
110 120 130 140 150
WVQNNVVNYA SEVKFRYIAV GNEVLPTGSN AQYAQYVLPA MKNVQSAITS
160 170 180 190 200
AGLQDQIKVS TATFSAVLGK SYPPSEGSFS DDVSSFINPI ISFLAENGSP
210 220 230 240 250
LLANIYPYFS YTGDTQNIRL DYALFTASGV VVQDGSYQYQ NLFDALLDAL
260 270 280 290 300
YAALEKAGGS NLKIVVSESG WPSEGGTAAT VDNARTYYKN LINHVKGGTP
310 320 330 340
RKSGAIETYL FAMFDENQKT GLETEKHFGL FTPGQESKYQ ISFS
Length:344
Mass (Da):37,093
Last modified:February 22, 2012 - v2
Checksum:iFB0E7417F0EB1A72
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN594957 Genomic DNA. Translation: CCB44250.1.
RefSeqiXP_002278123.1. XM_002278087.2.
UniGeneiVvi.13874.

Genome annotation databases

EnsemblPlantsiVIT_06s0061g00120.t01; VIT_06s0061g00120.t01; VIT_06s0061g00120.
GeneIDi100265368.
KEGGivvi:100265368.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN594957 Genomic DNA. Translation: CCB44250.1.
RefSeqiXP_002278123.1. XM_002278087.2.
UniGeneiVvi.13874.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiVIT_06s0061g00120.t01; VIT_06s0061g00120.t01; VIT_06s0061g00120.
GeneIDi100265368.
KEGGivvi:100265368.

Phylogenomic databases

eggNOGieuNOG08544.
InParanoidiA7PQW3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00332. Glyco_hydro_17. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla."
    Jaillon O., Aury J.-M., Noel B., Policriti A., Clepet C., Casagrande A., Choisne N., Aubourg S., Vitulo N., Jubin C., Vezzi A., Legeai F., Hugueney P., Dasilva C., Horner D., Mica E., Jublot D., Poulain J.
    , Bruyere C., Billault A., Segurens B., Gouyvenoux M., Ugarte E., Cattonaro F., Anthouard V., Vico V., Del Fabbro C., Alaux M., Di Gaspero G., Dumas V., Felice N., Paillard S., Juman I., Moroldo M., Scalabrin S., Canaguier A., Le Clainche I., Malacrida G., Durand E., Pesole G., Laucou V., Chatelet P., Merdinoglu D., Delledonne M., Pezzotti M., Lecharny A., Scarpelli C., Artiguenave F., Pe M.E., Valle G., Morgante M., Caboche M., Adam-Blondon A.-F., Weissenbach J., Quetier F., Wincker P.
    Nature 449:463-467(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Pinot noir / PN400241 Publication.
  2. Belchi-Navarro S., Almagro L., Bru R., Pedreno M.A.
    Submitted (JUL-2008) to UniProtKB
    Cited for: PROTEIN SEQUENCE OF 143-158.

Entry informationi

Entry nameiE13B_VITVI
AccessioniPrimary (citable) accession number: A7PQW3
Secondary accession number(s): F6GWB5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: February 22, 2012
Last modified: January 7, 2015
This is version 42 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.