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A7NPK3 (A7NPK3_ROSCS) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rcas_3449 EMBL ABU59499.1
OrganismRoseiflexus castenholzii (strain DSM 13941 / HLO8) [Complete proteome] [HAMAP] EMBL ABU59499.1
Taxonomic identifier383372 [NCBI]
Taxonomic lineageBacteriaChloroflexiChloroflexalesChloroflexaceaeRoseiflexus

Protein attributes

Sequence length544 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A7NPK3 [UniParc].

Last modified October 2, 2007. Version 1.
Checksum: F3FB900CD4574F92

FASTA54461,647
        10         20         30         40         50         60 
MRHFAQLYTD LDETTRTGAK VEALMRYFER AEPADAAWAI FFLIGRRVRQ AVPLPTLRAW 

        70         80         90        100        110        120 
AVEAAGIPDW LLGECYDAVG DFAETVALLL PEPGEWSVDV DRSVLSFEGP QPLHRWVEDV 

       130        140        150        160        170        180 
LIPLRDREEA VQRAIVRAVW ATLGGTERFV WNKLITGAFR VGVSQQLVVR ALARASGTDP 

       190        200        210        220        230        240 
AAIAHRLMGE WQPSAAFYRA LLARETADAD VSRPYPFCLA HPLDDPPETL GSIDEWQAEW 

       250        260        270        280        290        300 
KWDGIRIRLI RRAGQTFLWS RGEELMTDRF PEIAASGALL PDGIVIDGEV LPWKHGTVLP 

       310        320        330        340        350        360 
FAQLQRRIGR KNLTRAVLDE APATLLAYDL IELNGVDVRH QPLEWRRTEL ERLIATCAPD 

       370        380        390        400        410        420 
SQALLLSPVI VAADWDDLAA QWATSRARNV EGLMLKRRNS PYRVGRVRGD WWKWKVAPYT 

       430        440        450        460        470        480 
IDAVLIYAQR GSGKRASLYT DYTFAVWDGD RLTPFAKAYS GLTDDEIREV DAFVRRNTVE 

       490        500        510        520        530        540 
KFGPVRTVTP ALVFELAFEG VQRSNRHKSG IAVRFPRILR WRRDKRPADA DTLERVRALL 


PEES 

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References

[1]"Complete sequence of Roseiflexus castenholzii DSM 13941."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Bryant D.A., Hanada S., Tsukatani Y., Richardson P.
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13941 / HLO8.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000804 Genomic DNA. Translation: ABU59499.1.
RefSeqYP_001433517.1. NC_009767.1.

3D structure databases

ProteinModelPortalA7NPK3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING383372.Rcas_3449.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABU59499; ABU59499; Rcas_3449.
GeneID5540948.
KEGGrca:Rcas_3449.
PATRIC23345618. VBIRosCas91182_3856.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAGQPYPFF.
OrthoDBEOG6Q8HXT.
ProtClustDBCLSK955115.

Enzyme and pathway databases

BioCycRCAS383372:GH89-3492-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA7NPK3_ROSCS
AccessionPrimary (citable) accession number: A7NPK3
Entry history
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: November 13, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)