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A7NPK3

- A7NPK3_ROSCS

UniProt

A7NPK3 - A7NPK3_ROSCS

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Rcas_3449

Organism
Roseiflexus castenholzii (strain DSM 13941 / HLO8)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (02 Oct 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciRCAS383372:GH89-3492-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Rcas_3449Imported
    OrganismiRoseiflexus castenholzii (strain DSM 13941 / HLO8)Imported
    Taxonomic identifieri383372 [NCBI]
    Taxonomic lineageiBacteriaChloroflexiChloroflexiaChloroflexalesRoseiflexineaeRoseiflexaceaeRoseiflexus
    ProteomesiUP000000263: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi383372.Rcas_3449.

    Structurei

    3D structure databases

    ProteinModelPortaliA7NPK3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A7NPK3-1 [UniParc]FASTAAdd to Basket

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    MRHFAQLYTD LDETTRTGAK VEALMRYFER AEPADAAWAI FFLIGRRVRQ    50
    AVPLPTLRAW AVEAAGIPDW LLGECYDAVG DFAETVALLL PEPGEWSVDV 100
    DRSVLSFEGP QPLHRWVEDV LIPLRDREEA VQRAIVRAVW ATLGGTERFV 150
    WNKLITGAFR VGVSQQLVVR ALARASGTDP AAIAHRLMGE WQPSAAFYRA 200
    LLARETADAD VSRPYPFCLA HPLDDPPETL GSIDEWQAEW KWDGIRIRLI 250
    RRAGQTFLWS RGEELMTDRF PEIAASGALL PDGIVIDGEV LPWKHGTVLP 300
    FAQLQRRIGR KNLTRAVLDE APATLLAYDL IELNGVDVRH QPLEWRRTEL 350
    ERLIATCAPD SQALLLSPVI VAADWDDLAA QWATSRARNV EGLMLKRRNS 400
    PYRVGRVRGD WWKWKVAPYT IDAVLIYAQR GSGKRASLYT DYTFAVWDGD 450
    RLTPFAKAYS GLTDDEIREV DAFVRRNTVE KFGPVRTVTP ALVFELAFEG 500
    VQRSNRHKSG IAVRFPRILR WRRDKRPADA DTLERVRALL PEES 544
    Length:544
    Mass (Da):61,647
    Last modified:October 2, 2007 - v1
    Checksum:iF3FB900CD4574F92
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000804 Genomic DNA. Translation: ABU59499.1.
    RefSeqiWP_012121923.1. NC_009767.1.
    YP_001433517.1. NC_009767.1.

    Genome annotation databases

    EnsemblBacteriaiABU59499; ABU59499; Rcas_3449.
    GeneIDi5540948.
    KEGGirca:Rcas_3449.
    PATRICi23345618. VBIRosCas91182_3856.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000804 Genomic DNA. Translation: ABU59499.1 .
    RefSeqi WP_012121923.1. NC_009767.1.
    YP_001433517.1. NC_009767.1.

    3D structure databases

    ProteinModelPortali A7NPK3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 383372.Rcas_3449.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABU59499 ; ABU59499 ; Rcas_3449 .
    GeneIDi 5540948.
    KEGGi rca:Rcas_3449.
    PATRICi 23345618. VBIRosCas91182_3856.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci RCAS383372:GH89-3492-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 13941 / HLO8Imported.

    Entry informationi

    Entry nameiA7NPK3_ROSCS
    AccessioniPrimary (citable) accession number: A7NPK3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 2, 2007
    Last sequence update: October 2, 2007
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3