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A7NMC9

- A7NMC9_ROSCS

UniProt

A7NMC9 - A7NMC9_ROSCS

Protein

Xylose isomerase

Gene

xylA

Organism
Roseiflexus castenholzii (strain DSM 13941 / HLO8)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 51 (01 Oct 2014)
      Sequence version 1 (02 Oct 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei56 – 561UniRule annotation
    Active sitei59 – 591UniRule annotation
    Metal bindingi183 – 1831Magnesium 1UniRule annotation
    Metal bindingi219 – 2191Magnesium 1UniRule annotation
    Metal bindingi219 – 2191Magnesium 2UniRule annotation
    Metal bindingi222 – 2221Magnesium 2UniRule annotation
    Metal bindingi247 – 2471Magnesium 1UniRule annotation
    Metal bindingi289 – 2891Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciRCAS383372:GH89-2644-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    Ordered Locus Names:Rcas_2618Imported
    OrganismiRoseiflexus castenholzii (strain DSM 13941 / HLO8)Imported
    Taxonomic identifieri383372 [NCBI]
    Taxonomic lineageiBacteriaChloroflexiChloroflexiaChloroflexalesRoseiflexineaeRoseiflexaceaeRoseiflexus
    ProteomesiUP000000263: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi383372.Rcas_2618.

    Structurei

    3D structure databases

    ProteinModelPortaliA7NMC9.
    SMRiA7NMC9. Positions 4-389.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2115.
    HOGENOMiHOG000022596.
    KOiK01805.
    OMAiDLIPIDA.
    OrthoDBiEOG62NX4R.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013453. XylA_actinobac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02631. xylA_Arthro. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A7NMC9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDMYEPKPE HKFTFGLWTV GNIGRDPFGE PVRHPLSPVE IVHLLADVGA    50
    YGVNFHDNDL IPIDATPADR DRILREFKAA LQETGLVVPM ATTNLFADPV 100
    FKDGAFTSND PKVRAYALQK TMRAIDLGVE CGAKVYVFWG GREGVESDAA 150
    KDPQEGLKRY REVINFLCAY VKDQGYDLKF ALEPKPNEPR GDIYLATVGH 200
    ALAFINTLDH PDMVGLNPEV AHETMAGLNF LHGVAQAWDA GKLFHIDLND 250
    QVIGRYDQDF RFGAVNLKAA FFLVRFLENV GYQGSRHFDA HAYRTEDYEG 300
    VKTFARGCMR TYLILKEKAR RFDGDAEIQA LLAEITADDG TMAPFQGGYS 350
    RDKADALKAH PFDRVALGRR GLAYERLDQL TNELLLGVR 389
    Length:389
    Mass (Da):43,519
    Last modified:October 2, 2007 - v1
    Checksum:i2FB80952CBABBDCB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000804 Genomic DNA. Translation: ABU58691.1.
    RefSeqiYP_001432709.1. NC_009767.1.

    Genome annotation databases

    EnsemblBacteriaiABU58691; ABU58691; Rcas_2618.
    GeneIDi5540100.
    KEGGirca:Rcas_2618.
    PATRICi23343745. VBIRosCas91182_2937.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000804 Genomic DNA. Translation: ABU58691.1 .
    RefSeqi YP_001432709.1. NC_009767.1.

    3D structure databases

    ProteinModelPortali A7NMC9.
    SMRi A7NMC9. Positions 4-389.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 383372.Rcas_2618.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABU58691 ; ABU58691 ; Rcas_2618 .
    GeneIDi 5540100.
    KEGGi rca:Rcas_2618.
    PATRICi 23343745. VBIRosCas91182_2937.

    Phylogenomic databases

    eggNOGi COG2115.
    HOGENOMi HOG000022596.
    KOi K01805.
    OMAi DLIPIDA.
    OrthoDBi EOG62NX4R.

    Enzyme and pathway databases

    BioCyci RCAS383372:GH89-2644-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013453. XylA_actinobac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02631. xylA_Arthro. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 13941 / HLO8Imported.

    Entry informationi

    Entry nameiA7NMC9_ROSCS
    AccessioniPrimary (citable) accession number: A7NMC9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 2, 2007
    Last sequence update: October 2, 2007
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3