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A7NMA4 (A7NMA4_ROSCS) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.3 EMBL ABU58666.1
Gene names
Ordered Locus Names:Rcas_2590
OrganismRoseiflexus castenholzii (strain DSM 13941 / HLO8) [Complete proteome] [HAMAP] EMBL ABU58666.1
Taxonomic identifier383372 [NCBI]
Taxonomic lineageBacteriaChloroflexiChloroflexalesChloroflexaceaeRoseiflexus

Protein attributes

Sequence length802 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A7NMA4 [UniParc].

Last modified October 2, 2007. Version 1.
Checksum: C04025ACEE9B9CA1

FASTA80289,158
        10         20         30         40         50         60 
MTQTTVRYAP GWPGIPARWT SSAKTGIGTA LNPASRVWFT ISHGILNEIY YPRIDQACTR 

        70         80         90        100        110        120 
DCGLIVTDGH SFFSEEKRHT TSIVTMLAVG VPAYRLVNRC QQHRYQIEKM VITHPMYNAV 

       130        140        150        160        170        180 
LQQITFTPLQ GSLDQYSVFV LLAPHIGNRG AENTAWIGDY KGLPMLFAER YGLALAVACS 

       190        200        210        220        230        240 
APWTARSVGF VGSSDGWQDL VRNYRLTTLY ERAENGNVAL TGGIDVMACH GQFTIAIGFG 

       250        260        270        280        290        300 
QTWAEAAWHA RAGLSDEFDS VCATYIQAWQ TWQQTLTALT TIHQQVSAMV LRVHESKQFP 

       310        320        330        340        350        360 
GGSIASLSIP WGMAKGDDDL GGYHLVWPRD LVEIGGGLLA IGANDDAWRI LNYLALTQEP 

       370        380        390        400        410        420 
DGHWPQNMWL DGIPYWNGIQ MDETAFPILL LDLAVTTGAI DPATVYRYWP MVRRAASFLV 

       430        440        450        460        470        480 
RNGPVTAQDR WEENAGYSPF TLAVEIAALL VTAELAEQYG EPTIADYLRT TADSWNADID 

       490        500        510        520        530        540 
RWCYVTGTDL AHRVGVTGYY VRIAPPDVAE AASPMQGYVP IKNRPPDQAN APLSYIVSPD 

       550        560        570        580        590        600 
ALALVRFGLR DPHDPRIVNT VQVIDALLKI DTPCGPVWRR YTDDGYGEHQ DGAPFDGTGI 

       610        620        630        640        650        660 
GRGWPLLTGE RAHYELAAER VEAAKRLLIT LEAFANEGGF LPEQVWDSTD IPERELFFGR 

       670        680        690        700        710        720 
PAGSAMPLAW AHAEHLKLCR SLADQRLFDM PRVTAQRYLS RQVQSKIAIW RPNQKRRRIV 

       730        740        750        760        770        780 
AGMTLRIDLN AAAMIHWSAD HWQTIHDTTT AASGLGTFFA DLPTETLAPA TEIVFTLYWI 

       790        800 
DQQRWEGRDY TVQIEASGIS GE 

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References

[1]"Complete sequence of Roseiflexus castenholzii DSM 13941."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Bryant D.A., Hanada S., Tsukatani Y., Richardson P.
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13941 / HLO8.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000804 Genomic DNA. Translation: ABU58666.1.
RefSeqYP_001432684.1. NC_009767.1.

3D structure databases

ProteinModelPortalA7NMA4.
ModBaseSearch...

Protein-protein interaction databases

STRINGA7NMA4.

Protein family/group databases

CAZyGH15. Glycoside Hydrolase Family 15.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5540072.
GenomeReviewsGene locus Rcas_2590 in contig CP000804_GR.
KEGGrca:Rcas_2590.
PATRIC23343677. VBIRosCas91182_2903.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3387.
HOGENOMHBG290978.
OMARWEENAG.
ProtClustDBCLSK863981.

Enzyme and pathway databases

BioCycRCAS383372:RCAS_2590-MONOMER.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR006425. Glucoamylase_bac.
IPR015220. Glucodextran_N.
IPR011013. Glyco_hydro-type_carb-bd.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR011613. Glyco_hydro_15.
[Graphical view]
Gene3DG3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
KOK01178.
PfamPF09137. Glucodextran_N. 1 hit.
PF00723. Glyco_hydro_15. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF48208. Glyco_trans_6hp. 1 hit.
TIGRFAMsTIGR01535. Glucan_glucosid. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7NMA4_ROSCS
AccessionPrimary (citable) accession number: A7NMA4
Entry history
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)