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Protein
Submitted name:

MIP family channel protein

Gene

Rcas_2043

Organism
Roseiflexus castenholzii (strain DSM 13941 / HLO8)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciRCAS383372:GH89-2065-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
MIP family channel proteinImported
Gene namesi
Ordered Locus Names:Rcas_2043Imported
OrganismiRoseiflexus castenholzii (strain DSM 13941 / HLO8)Imported
Taxonomic identifieri383372 [NCBI]
Taxonomic lineageiBacteriaChloroflexiChloroflexiaChloroflexalesRoseiflexineaeRoseiflexaceaeRoseiflexus
Proteomesi
  • UP000000263 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei39 – 6325HelicalSequence analysisAdd
BLAST
Transmembranei84 – 10522HelicalSequence analysisAdd
BLAST
Transmembranei131 – 15121HelicalSequence analysisAdd
BLAST
Transmembranei163 – 18826HelicalSequence analysisAdd
BLAST
Transmembranei217 – 23721HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi383372.Rcas_2043.

Structurei

3D structure databases

ProteinModelPortaliA7NKW1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107R3W. Bacteria.
COG0580. LUCA.
HOGENOMiHOG000288285.
KOiK02440.
OMAiLSYQSGW.
OrthoDBiEOG6P8TRZ.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7NKW1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPFLGEVIG TMLLVLLGDG VVANVVLSKT KGNNSGWIVI ATAWALAVFV
60 70 80 90 100
GAYAVAAVSG AHLNPAVTIG LVVAGKFDAA SAPIYIAGQF LGAFIGAVLV
110 120 130 140 150
FLHYYPHWSA TQDPGLKLAV FSTGPAIRST AWNLVSEIIG TFVLVFGILA
160 170 180 190 200
IDGPVMDGGS FGALGIIPVA FLVWVIGLSL GGTTGYAINP ARDLGPRIAH
210 220 230 240
AILPIPGKGD SDWGYSWIPV VGPIIGGAVA AGLYVALGSF
Length:240
Mass (Da):24,428
Last modified:October 2, 2007 - v1
Checksum:i3DE5529C32F769FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000804 Genomic DNA. Translation: ABU58131.1.
RefSeqiWP_012120555.1. NC_009767.1.

Genome annotation databases

EnsemblBacteriaiABU58131; ABU58131; Rcas_2043.
KEGGirca:Rcas_2043.
PATRICi23342475. VBIRosCas91182_2306.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000804 Genomic DNA. Translation: ABU58131.1.
RefSeqiWP_012120555.1. NC_009767.1.

3D structure databases

ProteinModelPortaliA7NKW1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi383372.Rcas_2043.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABU58131; ABU58131; Rcas_2043.
KEGGirca:Rcas_2043.
PATRICi23342475. VBIRosCas91182_2306.

Phylogenomic databases

eggNOGiENOG4107R3W. Bacteria.
COG0580. LUCA.
HOGENOMiHOG000288285.
KOiK02440.
OMAiLSYQSGW.
OrthoDBiEOG6P8TRZ.

Enzyme and pathway databases

BioCyciRCAS383372:GH89-2065-MONOMER.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 13941 / HLO8Imported.

Entry informationi

Entry nameiA7NKW1_ROSCS
AccessioniPrimary (citable) accession number: A7NKW1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: March 16, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.