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A7NKE5 (A7NKE5_ROSCS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha-L-rhamnosidase EMBL ABU57965.1
Gene names
Ordered Locus Names:Rcas_1874
OrganismRoseiflexus castenholzii (strain DSM 13941 / HLO8) [Complete proteome] [HAMAP] EMBL ABU57965.1
Taxonomic identifier383372 [NCBI]
Taxonomic lineageBacteria › Chloroflexi › Chloroflexales › Chloroflexaceae › Roseiflexus

Protein attributes

Sequence length895 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A7NKE5 [UniParc].

Last modified October 2, 2007. Version 1.
Checksum: 2C46D61CC26C9350

FASTA895100,150
        10         20         30         40         50         60 
MTLFTVGHLR CEYLENPLGI DVTRPRLSWR LFSNRRGARQ TAYRIVAAPS ADDVAAEQNL 

        70         80         90        100        110        120 
LWDSGRVELD RSIHVVYEGG RLRSRQRVFW RVQAWDEHGN VAVSPVAWWE MGLLRRSDWT 

       130        140        150        160        170        180 
ASWIGAPLVG GRWTTIPAPF LRRSFTLDAP VMQARLYITA LGLYECTING QRVGQDLFTP 

       190        200        210        220        230        240 
GWTDYRRRVQ YQVYDVIDLL REGDNVIGVI LGDGWYCGHV AWAGRQNYGD RPKLLAQLMI 

       250        260        270        280        290        300 
TCADGSTQTM VSNRSWRYAF GPVLESDMLH GESYDARLEM PGWNMPGFDD SSWQPVELFA 

       310        320        330        340        350        360 
APDAALVATR GPTVRRHEEV RPVGPPTAFR SHQATRWVFD LGQNMVGWVR LRVRGPAGTT 

       370        380        390        400        410        420 
VTIRHAEALN PDGTIYTANL RSARATDHYT LRGEGEESWE PRFTFHGFRY VELSGYPGEP 

       430        440        450        460        470        480 
DIDAVTGIVV HSATPPTGEF NCSDPLINQL QHNIVWGQKS NFLDVPTDCP QRDERLGWTG 

       490        500        510        520        530        540 
DAQVFIRTAA FNMNVASFFT KWTQDLEDAQ SPEGAYPPVA PLAGISGLTD GGPAWADAGI 

       550        560        570        580        590        600 
ICPWTIYLCY GDARLLETHY PSMQRFIEYL ERSSRDFIRC YEDYPGFRGF GDWLALDGSG 

       610        620        630        640        650        660 
KVDGGTAKDL IGTAFFAHCA RLMSRIAAIL GHQRDAARYR RLFERVRQAF VTRYVTGAGR 

       670        680        690        700        710        720 
VAGETQTGYV LALHFDLLPP ELRPAATDAL ARDILARNTH LSTGFVGTPY LPHVLTAAGR 

       730        740        750        760        770        780 
LDLAYALLFQ QTWPSWLYPV TQGATTIWER WDGWTHDKGF QDPGMNSFNH YAYGAIGEWL 

       790        800        810        820        830        840 
YATVAGIDTD PEQPGYRHLI LRPQPGGGLT AARAALETMY GRAVSAWRID NDRFTWEVVV 

       850        860        870        880        890 
PPNTTATAYV PAPEGAMVRE SGQAADEAEG VTFVERNEET AIYRLTAGAY TFTVG

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References

[1]"Complete sequence of Roseiflexus castenholzii DSM 13941."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Bryant D.A., Hanada S., Tsukatani Y., Richardson P.
Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13941 / HLO8.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000804 Genomic DNA. Translation: ABU57965.1.
RefSeqYP_001431983.1. NC_009767.1.

3D structure databases

ProteinModelPortalA7NKE5.
ModBaseSearch...

Protein-protein interaction databases

STRINGA7NKE5.

Protein family/group databases

CAZyGH78. Glycoside Hydrolase Family 78.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5539352.
GenomeReviewsGene locus Rcas_1874 in contig CP000804_GR.
KEGGrca:Rcas_1874.
PATRIC23342091. VBIRosCas91182_2114.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG10735.
HOGENOMHBG696677.
OMAGENTDAK.
ProtClustDBCLSK954322.

Enzyme and pathway databases

BioCycRCAS383372:RCAS_1874-MONOMER.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR016007. Alpha_rhamnosid.
IPR008902. Bac_rhamnosid.
IPR013737. Bac_rhamnosid_N.
[Graphical view]
KOK05989.
PfamPF05592. Bac_rhamnosid. 1 hit.
PF08531. Bac_rhamnosid_N. 1 hit.
[Graphical view]
PIRSFPIRSF010631. A-rhamnsds. 1 hit.
SUPFAMSSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7NKE5_ROSCS
AccessionPrimary (citable) accession number: A7NKE5
Entry history
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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