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Protein

UPF0176 protein FTA_1178

Gene

FTA_1178

Organism
Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei181 – 1811Cysteine persulfide intermediateUniRule annotation

Enzyme and pathway databases

BioCyciFTUL458234:GH31-1079-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0176 protein FTA_1178UniRule annotation
Gene namesi
Ordered Locus Names:FTA_1178
OrganismiFrancisella tularensis subsp. holarctica (strain FTNF002-00 / FTA)
Taxonomic identifieri458234 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 332332UPF0176 protein FTA_1178PRO_1000081190Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliA7NCF1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini127 – 22195RhodaneseUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the UPF0176 family.UniRule annotation
Contains 1 rhodanese domain.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000034808.
KOiK07146.
OMAiDHKESYC.
OrthoDBiEOG6ND0G7.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176.
InterProiIPR001763. Rhodanese-like_dom.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A7NCF1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGIYMSQIVV CAMYKFVTLE DFEAMRQPLL DTMIKNNVKG TLLLANEGIN
60 70 80 90 100
GTVAGTRESI DNLLAYLKAD PRLVDIDYKE SYHQEMPFYR SKVKLKKEIV
110 120 130 140 150
TLGIDEIDPN KICGKYVEPK DWNDLISDPE TVLIDTRNEY EIEIGTFKNA
160 170 180 190 200
INPHTENFRE FPQYVDENLD PKKHKKVAMF CTGGIRCEKS TALLKAKGFD
210 220 230 240 250
EVYHLKGGIL KYLEEVPKEK SMWQGECFVF DSRVAVNHDL EKGNYDQCFA
260 270 280 290 300
CRMPITEDDK KRPEYVKGIS CHHCYDKVTE KQKARFAERE KQSQLAAEKG
310 320 330
FSHVGDEAKK LAQLNKQKKQ QAKEAARKKA QQ
Length:332
Mass (Da):38,226
Last modified:February 26, 2008 - v2
Checksum:i6F7B9663959B43DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000803 Genomic DNA. Translation: ABU61654.2.

Genome annotation databases

EnsemblBacteriaiABU61654; ABU61654; FTA_1178.
KEGGifta:FTA_1178.
PATRICi17947731. VBIFraTul129798_1230.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000803 Genomic DNA. Translation: ABU61654.2.

3D structure databases

ProteinModelPortaliA7NCF1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABU61654; ABU61654; FTA_1178.
KEGGifta:FTA_1178.
PATRICi17947731. VBIFraTul129798_1230.

Phylogenomic databases

HOGENOMiHOG000034808.
KOiK07146.
OMAiDHKESYC.
OrthoDBiEOG6ND0G7.

Enzyme and pathway databases

BioCyciFTUL458234:GH31-1079-MONOMER.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176.
InterProiIPR001763. Rhodanese-like_dom.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FTNF002-00 / FTA.

Entry informationi

Entry nameiY1178_FRATF
AccessioniPrimary (citable) accession number: A7NCF1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: February 26, 2008
Last modified: November 11, 2015
This is version 45 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.