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A7N642 (A7N642_VIBCB) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein EMBL ABU73159.1
Gene names
Ordered Locus Names:VIBHAR_05253 EMBL ABU73159.1
ORF Names:M892_25045 EMBL AGU97819.1
OrganismVibrio campbellii (strain ATCC BAA-1116 / BB120) [Complete proteome] [HAMAP] EMBL ABU73159.1
Taxonomic identifier338187 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length449 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A7N642 [UniParc].

Last modified October 2, 2007. Version 1.
Checksum: D2C8C51D7C927C69

FASTA44950,658
        10         20         30         40         50         60 
MSGLQETQST GANVILHAFD WKYADIAQRA AEISELGYGS VLVSPPMKSA QDERWWQRYQ 

        70         80         90        100        110        120 
PQDYRVIDNA LGNTTDFKNM VEALDRVGVL VYADVVFNHM ANEAHLRSDL QYPRQAVMDD 

       130        140        150        160        170        180 
YQQNASKYQD LILFGDLSEP LFDENDFVEA FGIKDWKDKW EVQNGRISGG PTDPGLPTLR 

       190        200        210        220        230        240 
VCKHVVEQQR TYLKALKALG VKGFRIDAAK HMTLEHLKLV WTEDITQDVH IFGEIITDGG 

       250        260        270        280        290        300 
ATEEEYELFL EPYLKETRLG AYDFPLFSTI FKAFSKKGSF KSLIDPYCFG QALSNRRAIT 

       310        320        330        340        350        360 
FAITHDIPNN DVFLDLVMDE ENEWLAYAYI LGRDGGVPLI YTDLDTSGIK GVDGKPRWQN 

       370        380        390        400        410        420 
AWKDARMAKV VAFHNLVHGE PMTVLEGNDD MLVLQRGEKG ILVLNKSARA QSLQLTVNKA 

       430        440 
LVDMMTGEEV PSGEEIKVAA KSAMLLVEK 

« Hide

References

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000790 Genomic DNA. Translation: ABU73159.1.
CP006606 Genomic DNA. Translation: AGU97819.1.
RefSeqYP_001447386.1. NC_009784.1.
YP_008529556.1. NC_022270.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING338187.VIBHAR_05253.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABU73159; ABU73159; VIBHAR_05253.
GeneID16819128.
5557094.
KEGGvha:VIBHAR_05253.
PATRIC20134978. VBIVibHar24526_3977.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000274290.
KOK01176.
OMALGAYDFP.
OrthoDBEOG6RZB1B.
ProtClustDBCLSK2394055.

Enzyme and pathway databases

BioCycVHAR338187:GJCH-4239-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA7N642_VIBCB
AccessionPrimary (citable) accession number: A7N642
Entry history
Integrated into UniProtKB/TrEMBL: October 2, 2007
Last sequence update: October 2, 2007
Last modified: March 19, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)