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A7N5N0

- A7N5N0_VIBCB

UniProt

A7N5N0 - A7N5N0_VIBCB

Protein
Submitted name:

Alpha-amylase

Gene

VIBHAR_04858

Organism
Vibrio campbellii (strain ATCC BAA-1116 / BB120)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (02 Oct 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciVHAR338187:GJCH-3844-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:VIBHAR_04858Imported
    ORF Names:M892_26835Imported
    OrganismiVibrio campbellii (strain ATCC BAA-1116 / BB120)Imported
    Taxonomic identifieri338187 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000008152: Chromosome II

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi338187.VIBHAR_04858.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000273912.
    KOiK01176.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A7N5N0-1 [UniParc]FASTAAdd to Basket

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    MKLNLITTTL LLASASAIAE PNITISTTTN SRDFPLSAEQ SLVVPLTKDG    50
    YTLKITGVEG DCVAPDGQKV KFNKPIALNC GKPTELPLKI RFTGDYSFAF 100
    DAEAKTLRFK REPKKAAKTE FKRPIPKVQC EVYQGGEVTI ALGDSFPDGT 150
    KLRDAYSGQM VEVKDQQVSL TPSKDSGGLV LLEPVKKTKE AVPFDYRNAN 200
    IYFVMVDRFN NADTSNDNSY GRNKDGKEEI GTFHGGDLKG VIEKLDYIKS 250
    LGTDAIWLSP IVEQVHGFVG GGDSGSFPFY AYHGYWTRDF TKIDENFGDE 300
    DDLKLLVEEA HKRGLKVLMD AVINHTGYST LADLQFDGIE VLKPNADLPK 350
    KWGDWQPKAG ENWHSYHQNI DYQSPNWAKW WGGDWVRTGL PGYPAPGSSD 400
    ITLSLAGLPD FITESDKAVK PAQWLLDNPG TGVEARDNYT VSDYLIEWQT 450
    DWVKRFGIDG YRVDTVKHVE GDVWKRLKEE ASSSLEQWRK ENGKSGQPFW 500
    MMGEVWGHTA YRSPYFDDGF DALINFDMQR KLDKGAACFS QMADTYQSYA 550
    NTIANEKDFN PVSYMSSHDT ELFFSRFKDY GMQRNAANAL LLGPGAVQVY 600
    YGDEVGRNIG PYADDFHQGT RSDMVWKLSD EKQALLKHWQ TLGQFRKAHP 650
    AIGAGQHQVI EQEGAYVFSR SLGNDKVVVA FVGREK 686
    Length:686
    Mass (Da):76,842
    Last modified:October 2, 2007 - v1
    Checksum:iC911EDAC593A5A71
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000790 Genomic DNA. Translation: ABU72766.1.
    CP006606 Genomic DNA. Translation: AGU98048.1.
    RefSeqiWP_011999162.1. NC_022270.1.
    YP_001446993.1. NC_009784.1.
    YP_008529909.1. NC_022270.1.

    Genome annotation databases

    EnsemblBacteriaiABU72766; ABU72766; VIBHAR_04858.
    AGU98048; AGU98048; M892_26835.
    GeneIDi16819716.
    5558353.
    KEGGivca:M892_26835.
    vha:VIBHAR_04858.
    PATRICi20134267. VBIVibHar24526_3623.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000790 Genomic DNA. Translation: ABU72766.1 .
    CP006606 Genomic DNA. Translation: AGU98048.1 .
    RefSeqi WP_011999162.1. NC_022270.1.
    YP_001446993.1. NC_009784.1.
    YP_008529909.1. NC_022270.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 338187.VIBHAR_04858.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABU72766 ; ABU72766 ; VIBHAR_04858 .
    AGU98048 ; AGU98048 ; M892_26835 .
    GeneIDi 16819716.
    5558353.
    KEGGi vca:M892_26835.
    vha:VIBHAR_04858.
    PATRICi 20134267. VBIVibHar24526_3623.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000273912.
    KOi K01176.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci VHAR338187:GJCH-3844-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-1116Imported and ATCC BAA-1116 / BB120Imported.
    2. "Vibrio campbellii hmgA-mediated pyomelanization impairs quorum sensing, virulence, and cellular fitness."
      Wang Z., Lin B., Mostaghim A., Rubin R.A., Glaser E.R., Mittraparp-Arthorn P., Thompson J.R., Vuddhakul V., Vora G.J.
      Front. Microbiol. 4:379-379(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: ATCC BAA-1116Imported.

    Entry informationi

    Entry nameiA7N5N0_VIBCB
    AccessioniPrimary (citable) accession number: A7N5N0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 2, 2007
    Last sequence update: October 2, 2007
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3