A7N5B9 (A7N5B9_VIBHB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Aminomethyltransferase RuleBase RU003981
EC=2.1.2.10 RuleBase RU003981

Gene names

Ordered Locus Names:

VIBHAR_05968

Organism

Vibrio harveyi (strain ATCC BAA-1116 / BB120) [Complete proteome] [HAMAP]

Taxonomic identifier

338187 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	376 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The glycine cleavage system catalyzes the degradation of glycine By similarity. RuleBase RU003981
Catalytic activity	[Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH3. SAAS SAAS006223 RuleBase RU003981
Subunit structure	The glycine cleavage system is composed of four proteins: P, T, L and H By similarity. RuleBase RU003981
Sequence similarities	Belongs to the GcvT family. RuleBase RU003980

Ontologies

Keywords
Molecular function	Aminotransferase SAAS SAAS006223 RuleBase RU003981 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycine catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	aminomethyltransferase activity Inferred from electronic annotation. Source: EC transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A7N5B9 [UniParc]. Last modified October 2, 2007. Version 1. Checksum: 873C37E9242AD77E	FASTA	376	40,794
	10 20 30 40 50 60 METKMTQELL KTPLHALHVE VGAKMVPFAG YDMPVQYPLG VKKEHLHTRD AAGLFDVSHM 70 80 90 100 110 120 GQLRLIGDGA AAFLETLVPV DIVDLGAGKQ RYAFFTNEQG GIMDDLMVAN LGDHLFVVVN 130 140 150 160 170 180 AACKEQDIAH LQAHLPSGIE LEIIDDRALL AIQGPKAAEV LARFAPEVAE MLFMDVRKVE 190 200 210 220 230 240 LLGVECIISR SGYTGEDGYE ISVPAEKAEE LARKLTGEEE VEWIGLGARD SLRLECGLCL 250 260 270 280 290 300 YGHDLDTTTT PVEASLLWGI QKVRRADGER AGGFPGADII LKQIETKDVA RKRIGLVGQT 310 320 330 340 350 360 KAPVREGAEL FDAEGNKIGV VTSGTAGPNA GKPVSMGYVR ADLAAIGTEL FAEVRGKMLP 370 MTVEKMPFVP QRYYRG

References

[1]

Bassler B., Clifton S.W., Fulton L., Delehaunty K., Fronick C., Harrison M., Markivic C., Fulton R., Tin-Wollam A.-M., Shah N., Pepin K., Nash W., Thiruvilangam P., Bhonagiri V., Waters C., Tu K.C., Irgon J., Wilson R.K. Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1116 / BB120.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000790 Genomic DNA. Translation: ABU73861.1.
RefSeq	YP_001448088.1. NC_009784.1.
3D structure databases
ProteinModelPortal	A7N5B9.
ModBase	Search...
Protein-protein interaction databases
STRING	A7N5B9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5558913.
GenomeReviews	Gene locus VIBHAR_05968 in contig CP000790_GR.
KEGG	vha:VIBHAR_05968.
NMPDR	fig|338187.4.peg.3527.
PATRIC	20136263. VBIVibHar24526_4611.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0404.
HOGENOM	HBG299834.
OMA	MPVQYPL.
ProtClustDB	CLSK910129.
Family and domain databases
InterPro	IPR013977. GCV_T_C. IPR006222. GCV_T_N. IPR006223. GcvT. [Graphical view]
KO	K00605.
PANTHER	PTHR13847:SF5. PTHR13847:SF5. 1 hit.
Pfam	PF01571. GCV_T. 1 hit. PF08669. GCV_T_C. 1 hit. [Graphical view]
PIRSF	PIRSF006487. GcvT. 1 hit.
TIGRFAMs	TIGR00528. GcvT. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A7N5B9_VIBHB

Accession

Primary (citable) accession number: A7N5B9

Entry history

Integrated into UniProtKB/TrEMBL:	October 2, 2007
Last sequence update:	October 2, 2007
Last modified:	December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)