A7N1N0 (A7N1N0_VIBHB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein EMBL ABU70533.1

Gene names

Ordered Locus Names:

VIBHAR_01563 EMBL ABU70533.1

Organism

Vibrio harveyi (strain ATCC BAA-1116 / BB120) [Complete proteome] [HAMAP] EMBL ABU70533.1

Taxonomic identifier

338187 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio harveyi group › Vibrio harveyi

Protein attributes

Sequence length	741 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Ontologies

Keywords
Ligand	Magnesium PIRSR PIRSR009407-3 Metal-binding PIRSR PIRSR009407-3
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	isocitrate dehydrogenase (NADP+) activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Region	134 – 141	8	Substrate binding By similarity PIRSR PIRSR009407-2
Sites
	Metal binding	352	1	Magnesium or manganese By similarity PIRSR PIRSR009407-3
	Metal binding	550	1	Magnesium or manganese By similarity PIRSR PIRSR009407-3
	Metal binding	554	1	Magnesium or manganese By similarity PIRSR PIRSR009407-3
	Binding site	147	1	Substrate By similarity PIRSR PIRSR009407-2
	Binding site	549	1	Substrate By similarity PIRSR PIRSR009407-2
	Site	257	1	Critical for catalysis By similarity PIRSR PIRSR009407-1
	Site	422	1	Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

	Sequence		Length	Mass (Da)
	A7N1N0 [UniParc]. Last modified October 2, 2007. Version 1. Checksum: 8F25295125ECB865	FASTA	741	79,986
	10 20 30 40 50 60 MPTEKPTIIY TITDEAPALA TYSLLPIIQS FTASSGINVD TRDISLAGRI IANFPEHLKE 70 80 90 100 110 120 DQRIGDALAE LGELAKTPEA NIIKLPNISA SIPQLKAAIK ELQAKGYELP NYPEEPSTYE 130 140 150 160 170 180 EEAIKATYDK IKGSAVNPVL REGNSDRRAP LSVKNYAKKN PHSMGAWSAD SQSHVSSMAD 190 200 210 220 230 240 NDFFGSEKST TISGATDVKI EFVAADGSVK ELKSAFPLQD KEVIDCAVMN KKALVEFFEK 250 260 270 280 290 300 EIAEAKQQDV LLSLHMKATM MKVSDPVIFG HAVKVYYKDV FAKYGKLFEE LGVDVNNGIG 310 320 330 340 350 360 DVYAKIEALP AEQKAEIEAA ILAVYETQPA LAMVDSDRGI TNLHVPSDII VDASMPAMLR 370 380 390 400 410 420 ASGQMWGPDG KQKDTKAMIP DRSYAAIYQA VIDFCKEHGA FDPTTMGSVP NVGLMAQKAE 430 440 450 460 470 480 EYGSHDKTFI LDAAGSVRVV AASGAVLLEQ AVEEGDIFRM CQVKDAPIQD WVKLAVTRAR 490 500 510 520 530 540 ASGAPAVFWL DEARAHDAEL IKKVNAHLPE HDTSGLEIKI LAPIDACKFS LERIKEGLDT 550 560 570 580 590 600 ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKENH 610 620 630 640 650 660 LRWDSLGEFL ALAASLEHLS TVAGNAKAQV LADALDKATG EFLDNNKSPS RKVGELDNRG 670 680 690 700 710 720 SHYYLASYWA KALAEQTADA DLAAEFVPVA AALAQQEEAI VSELNNAQGV KGELGGYYSL 730 740 DDALASTLMR PSATLNAIIN K

References

[1]

The Vibrio harveyi Genome Sequencing Project Bassler B., Clifton S.W., Fulton L., Delehaunty K., Fronick C., Harrison M., Markivic C., Fulton R., Tin-Wollam A.-M., Shah N., Pepin K., Nash W., Thiruvilangam P., Bhonagiri V., Waters C., Tu K.C., Irgon J., Wilson R.K. Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1116 / BB120.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000789 Genomic DNA. Translation: ABU70533.1.
RefSeq	YP_001444760.1. NC_009783.1.
3D structure databases
ProteinModelPortal	A7N1N0.
SMR	A7N1N0. Positions 6-739.
ModBase	Search...
Protein-protein interaction databases
STRING	338187.VIBHAR_01563.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABU70533; ABU70533; VIBHAR_01563.
GeneID	5553350.
KEGG	vha:VIBHAR_01563.
PATRIC	20129925. VBIVibHar24526_1505.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2838.
HOGENOM	HOG000240860.
KO	K00031.
OMA	FRMCQTK.
ProtClustDB	CLSK867411.
Family and domain databases
Gene3D	3.40.718.10. 3 hits.
InterPro	IPR004436. Isocitrate_DH_NADP_mono. IPR024084. IsoPropMal-DH-like_dom. [Graphical view]
Pfam	PF03971. IDH. 1 hit. [Graphical view]
PIRSF	PIRSF009407. IDH_monmr. 1 hit.
TIGRFAMs	TIGR00178. monomer_idh. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A7N1N0_VIBHB

Accession

Primary (citable) accession number: A7N1N0

Entry history

Integrated into UniProtKB/TrEMBL:	October 2, 2007
Last sequence update:	October 2, 2007
Last modified:	May 1, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)