A7N1D1 (A7N1D1_VIBHB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ABU69474.1

Gene names

Ordered Locus Names:

VIBHAR_00459

Organism

Vibrio harveyi (strain ATCC BAA-1116 / BB120) [Complete proteome] [HAMAP]

Taxonomic identifier

338187 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	374 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA. SAAS SAAS020613
Pathway	Lipid metabolism; fatty acid beta-oxidation. SAAS SAAS020613
Subunit structure	Heterotetramer of two alpha chains (fadB) and two beta chains (fadA) By similarity. SAAS SAAS020613
Sequence similarities	Belongs to the thiolase family. RuleBase RU003557

Ontologies

Keywords
Biological process	Fatty acid metabolism SAAS SAAS020613 Lipid degradation SAAS SAAS020613 Lipid metabolism
Cellular component	Cytoplasm SAAS SAAS020613
Molecular function	Acyltransferase SAAS SAAS012805 RuleBase RU003558 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	fatty acid metabolic process Inferred from electronic annotation. Source: UniProtKB-KW lipid catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	acetyl-CoA C-acyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A7N1D1 [UniParc]. Last modified October 2, 2007. Version 1. Checksum: 91B8229365E17389	FASTA	374	39,444
	10 20 30 40 50 60 MGRSKGGAFR HTRAEDLSAR LMKGILARNP QVNPSEIEDI YWGCVQQTLE QGFNVARNAA 70 80 90 100 110 120 LLAGLPIEIG AVTVNRLCGS SMQALHDGTR AIMTGDAEIC LIGGVEHMGH VPMNHGVDFH 130 140 150 160 170 180 PGMSKTVAKA AGMMGLTAEM LGKLHGISRE QQDEFAARSH ARAHAATVEG RFKNEILPIE 190 200 210 220 230 240 GHAADGTLFT LDYDEVIRPE TSVEGLSQLR PVFDPANGTV TAGTSSALSD GASAMLIMSE 250 260 270 280 290 300 EKANELGLKI RARIKGMAIA GCDPSIMGYG PVPATQKALK RAGLSIEDMD VVELNEAFAA 310 320 330 340 350 360 QSLPCAKDLG LLDVMDEKVN LNGGAIALGH PLGCSGSRIS TTLINLMEAK DAKYGLATMC 370 IGLGQGIATV FERP

References

[1]

Bassler B., Clifton S.W., Fulton L., Delehaunty K., Fronick C., Harrison M., Markivic C., Fulton R., Tin-Wollam A.-M., Shah N., Pepin K., Nash W., Thiruvilangam P., Bhonagiri V., Waters C., Tu K.C., Irgon J., Wilson R.K. Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1116 / BB120.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000789 Genomic DNA. Translation: ABU69474.1.
RefSeq	YP_001443701.1. NC_009783.1.
3D structure databases
ProteinModelPortal	A7N1D1.
SMR	A7N1D1. Positions 1-373.
ModBase	Search...
Protein-protein interaction databases
STRING	A7N1D1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5553199.
GenomeReviews	Gene locus VIBHAR_00459 in contig CP000789_GR.
KEGG	vha:VIBHAR_00459.
NMPDR	fig|338187.4.peg.355.
PATRIC	20127801. VBIVibHar24526_0483.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0183.
HOGENOM	HBG370930.
OMA	SSMEAIH.
ProtClustDB	PRK08947.
Family and domain databases
InterPro	IPR012805. FadA. IPR002155. Thiolase. IPR016039. Thiolase-like. IPR016038. Thiolase-like_subgr. IPR020615. Thiolase_acyl_enz_int_AS. IPR020610. Thiolase_AS. IPR020617. Thiolase_C. IPR020613. Thiolase_CS. IPR020616. Thiolase_N. [Graphical view]
Gene3D	G3DSA:3.40.47.10. Thiolase-like_subgr. 4 hits.
KO	K00632.
PANTHER	PTHR18919:SF35. PTHR18919:SF35. 1 hit. PTHR18919. Thiolase. 1 hit.
Pfam	PF02803. Thiolase_C. 1 hit. PF00108. Thiolase_N. 1 hit. [Graphical view]
PIRSF	PIRSF000429. Ac-CoA_Ac_transf. 1 hit.
SUPFAM	SSF53901. Thiolase-like. 2 hits.
TIGRFAMs	TIGR01930. AcCoA-C-Actrans. 1 hit. TIGR02445. FadA. 1 hit.
PROSITE	PS00098. THIOLASE_1. 1 hit. PS00737. THIOLASE_2. 1 hit. PS00099. THIOLASE_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A7N1D1_VIBHB

Accession

Primary (citable) accession number: A7N1D1

Entry history

Integrated into UniProtKB/TrEMBL:	October 2, 2007
Last sequence update:	October 2, 2007
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)